Desulfotomaculum nigrificans: Desca_0193
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Entry
Desca_0193 CDS
T01498
Name
(GenBank) RNA polymerase, sigma-24 subunit, SigH, ECF subfamily
KO
K27000
RNA polymerase sigma-H factor
Organism
dca
Desulfotomaculum nigrificans
Brite
KEGG Orthology (KO) [BR:
dca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dca03021
]
Desca_0193
Transcription machinery [BR:
dca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Desca_0193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
HTH_23
HTH_38
HTH_36
HTH_30
Sigma70_ECF
DUF6179
Topo-VIb_trans
DUF1676
Motif
Other DBs
NCBI-ProteinID:
AEF93097
UniProt:
F6B578
LinkDB
All DBs
Position
211726..212370
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AA seq
214 aa
AA seq
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MSLNAQREVSGGYHFMVDEDVVEFAREGDDAALEYLINKYKNFVRAKARSYFLIGADRED
IIQEGMIGLYKAIRDFRMDKLSSFRAFAELCITRQIITAIKTATRQKHIPLNSYVSLNKP
IYDEDSDRTLLDVISGSKITDPEELIISREEFDDIEEKMGEILSSLEWKVLMSYLEGKSY
QEIAEDLKRHVKSIDNALQRVKRKLERYLEKREA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaaatgcacaaagggaagtttccggcggatatcatttcatggttgatgaagat
gtggtagagtttgcgcgtgaaggtgatgatgcagcgctggaatacttgattaataaatac
aaaaactttgtgcgtgccaaggctcgctcatacttccttatcggagcagatagagaagat
atcatccaagagggtatgattggattatataaagccattcgggacttccgaatggacaag
ctttcttctttccgggcttttgctgagctgtgtattacccggcagattattacagccatt
aaaaccgccaccagacaaaaacatatcccgttaaactcttacgtgtcattaaataaaccc
atttatgacgaagattccgaccgtaccctgttggatgtcatctccggctctaaaatcacc
gacccggaggaattgatcatcagtcgtgaagaatttgatgatattgaagaaaaaatgggt
gaaatattaagctctctggaatggaaggttttaatgtcttatttagaaggcaagtcctat
caggaaattgccgaagatctaaaacgacatgtcaagtccattgacaacgctctgcaaaga
gtaaaacgcaagttggaaagatatttggaaaaacgcgaagcctaa
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