Dermochelys coriacea (leatherback sea turtle): 119858735
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Entry
119858735 CDS
T09064
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X4
KO
K16617
collagen type XIII alpha
Organism
dcc
Dermochelys coriacea (leatherback sea turtle)
Brite
KEGG Orthology (KO) [BR:
dcc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcc00536
]
119858735 (COL13A1)
Glycosaminoglycan binding proteins [BR:
dcc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
119858735 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
119858735
NCBI-ProteinID:
XP_038265955
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All DBs
Position
7:83122249..83293897
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AA seq
736 aa
AA seq
DB search
MLEEKGWKGASNGAFDRGCIAPPGTGDGERCCRFPLLLGSGLPGVTLISLVLSLLLYFRT
SDLQSRVSHLEADRCIQLPAWLSADQMETAILGRVDQLLDEKLKINLPRNREVRDTHQRC
NCPAGPPGPTGRPGLPGDKGAMGIPGRPGLKGQPGEKGTPGEAGMSIIGPRGPPGQPGTR
GFPGFPGPIGLDGKPGHSGHKGEMGVAGPKGQPGPPGQKGEKGQCGDYPHRLLPLLNSVR
LAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPTGPSGPAGNPGQPGLVGPPGKAGEPGK
AGKDGKGLPGPPGPKGDPGIQGYHGRKGVPGMAASGMKGEKGRAGDPGLPGFLGQKGEKG
DAGNSLGGGKGEPGPRGLPGPPGPKGKAGDIGQTGIAGPQGEKGEPGAPGKQGPVGPRGP
KGEPGKDEIVDYDGNINEALQEIRTLALMGPPGLPGVAGTPGLPGQKGEIGLPGPPGHDG
EKGPRGKSGEVGPPGPQGPPGKEGSPGVKGETGLTGTPGAKGEKGEAGEAGSPGLDGPNG
EKGERGDQGIPGPSGLPGLIGLPGLTGEKGEPGEDGEKGDPGDSVSGPPGPQGPPGAAGL
QGLPGPKGEAGIDGMKGEKGVEGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGAPGPAGP
KGERGSKGDPGNAGPKGPAGLPGLQGPSGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAP
CPLGEDGLPVQGCWNK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgctggaggagaagggctggaaaggtgctagcaatggtgcctttgacagggggtgcatt
gctccccccgggacaggggatggagaaagatgctgcaggtttcctctactgctgggctct
gggcttcctggggtgactttgatttctctggtgttgagcctcctgctatactttaggaca
tcagacctgcaatccagggtttcacatttggaagcagacagatgcattcagctccctgcc
tggctctctgcagaccaaatggagacagctattttgggaagagttgaccaactgcttgat
gagaaattaaagatcaacttgccgagaaatcgagaagttcgagatacccaccagaggtgc
aactgcccagcaggtcctcctggccctacaggaagaccagggcttccgggtgacaaaggc
gccatggggatccctggaagaccgggactaaaggggcaacccggagagaagggaacccct
ggagaagcaggcatgtccatcattggtccccgaggccctcccggacagcctggaacaaga
ggttttcctggatttccgggcccgattggtttggatggcaaacctggccattctggacat
aagggggagatgggtgttgctggtcccaagggacagccgggacctccaggacaaaaagga
gaaaagggccagtgtggagactacccacacaggctgttgcctctcctcaattcagtgcgg
ctggctccacccccggtcataaagagacgcactttccagggtgaacaaggacaggcgggg
attcaaggtccaccagggccacctggtccaccagggccaactggaccatctggaccagca
ggaaatccaggacaacctggcctagttgggccacctggcaaagcaggggagcctggaaag
gcaggcaaggatggaaagggtttacctggaccccctggaccaaagggagaccctggaatt
caaggatatcatgggaggaagggggttcctggaatggctgcttcagggatgaagggagag
aagggaagagctggtgatcccggacttcctggattcctaggacaaaagggagagaaggga
gatgctggcaattccctcgggggaggtaaaggggaacccggaccccggggactacctggg
cctccaggaccaaaggggaaagctggtgacattggccagactggcattgcaggaccgcag
ggggaaaagggagaacctggagcacctggaaaacaggggcctgtcggtccaaggggtccc
aaaggggagccaggaaaggatgaaattgtggattatgatggtaacatcaacgaagctcta
caggaaatacgaaccttggccctgatgggacctcctggacttccaggagtagctgggacc
ccagggctaccaggacagaagggtgaaattggtttgccgggtcctcctggacacgatgga
gagaaggggccacgtggtaaatcaggagaggtggggcctcctggtccccaagggccccca
ggaaaggaaggatctccaggagtgaagggagagactggacttacggggaccccaggagca
aagggggaaaagggggaggcaggagaagctggctctccgggtcttgatggcccaaatggg
gagaaaggagaacgaggtgaccaagggataccaggaccttcaggattaccaggtctaatt
ggacttccaggattgacaggagagaaaggagaacctggtgaggatggagaaaaaggagac
ccaggggactcagtatcggggccacccgggccccaaggcccaccaggtgctgcaggtctt
caaggcctgccaggaccgaagggggaagcagggattgatggaatgaaaggagagaagggt
gtcgagggtgagaaaggagaccgaggtccactgggattgcccggtgcttcaggtttagac
ggcaggcctggaccaccgggtactccaggaccaattggagctccaggaccagcaggacca
aaaggggaaaggggcagtaaaggagaccctggaaatgcaggaccaaaggggccagctggg
cttcctggtttacaaggcccatctggtgacaaaggaaaccggggggagaggggcaagaaa
ggctctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgcaccc
tgtccattgggggaagatggcttgccagttcagggctgctggaataagtaa
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