Daucus carota (carrot): 108194743
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Entry
108194743 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108194743
Organism
dcr
Daucus carota (carrot)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_1
RT_RNaseH_2
RT_RNaseH
Retrotrans_gag
RdRP_1
Motif
Other DBs
NCBI-GeneID:
108194743
NCBI-ProteinID:
XP_017217170
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All DBs
Position
7:18016936..18021579
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AA seq
1327 aa
AA seq
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MSNHGETTPGGNQPPDPRSGIGDNPPVDNTPVGNASQDRAIIITDGESGVMRRPISSSPP
VFMSNEELLKELHYLRNEAREQQALRERVAQLESLVPGTHRSGKQPFEEESQSGHRDDRR
PVIVPRNLFASGGQTTAGGEGARDGGRPPQDRRATAHLEEASRDVNALAERYRGRVSRAD
LLALIKDLESRPEYASTGSRTAGTGREGHRKEIPHGSDSRSYDRSQEQEPRGLGGRSERD
PIVLEGRQSQGGTREHATSPGNGKTHHQANLDQTIADPHIQASSQANAHANPHIQASSQA
NAPPSAQTHANQSNPLATANDLMATGTLPSMTLSQPNVQTIPGIGAIDVNSLRKLLAHFD
GSQTSLSSQALSPFSAEVIEAPLPANYRNTTSDLKFHSNSDAVEFLGRFNVEMGVYQIPD
PVRCRLLAATFRDSAYQWFRKLEPASITSWTSMQTMFLTQFQATVKYAPPVTTLANIKQK
EGETLHAYFKRFNAESSNVRGATDETLKSFLVAGLRVGTDFWKHLQGNDPKSLADLYARA
EAYKNVEQSLAESRKNERSPGKARQKRRDRSPSPEQRGRRRSPNRVNTMYRRNYTPPRDH
EEREDRWTPLAAPIDHIFEVNRDKGLFRRPAPLNSWQSKNKDKYCEYHESTGHDTHECRQ
LKEEIELLIKEGQLNEWIMREARSRRDIRAKDRRGLGYTGDQERGKQEDIQFVKEGSIHV
IFGGPHLAGEGTRAMERYAKEAKEEDARWVHHPHNDALVIALRIGPMNVHRVLVDNGSSV
NILYYGTYQKLGLPDKDMKVEDVYIYGFGGEAVKEKGETSGTKEESDLDPRLPLESAKTG
LAEDTVEIQVGEAREAKILKIGSKLKGELKASLIRFLRSNLDVFAWCHADMVGIDPEVMS
HHLNIDPTKKGMRQKRRPVSGERAQALKEEVDRLLGAKLIKESFYPTWLANPVLVKKPNG
KWRTCVDFTDLNKACPKDSFPLPRIDQLVDATAGNALLSFMDAYSGYNQIPMHEPDQEHT
SFITDRGLYCYIGMPFGLINAGATYQRLVNMMFKEKIGKTMEVYVDDMLVKSKEARDHVR
HLAEMFDILRKYRMKLNPQKCVFGVESGKFLGFMVNHRGIEANPAKIKALLDMKSPQNVR
QVQSLTGMIAALNRCVSKSSDRCKEFFKAIKEAGQTFLWTEECEGAFQKIKEQLGKPPLL
AKPSEGETLILYLAVSRYSVSAVLVKEEKDVQFPVYYVSKRLQDAETRYTSMEKLVYSLI
LAARKLRPYFQAHKIEVRTSYPLRQIMHKPEATGRLMKWAVELGQFGEGGEGCPVPGVLC
EQKVTGR
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcacggcgagacaacgcccggcgggaaccaaccccctgatcctagatcaggg
ataggcgataaccctcccgtcgacaatacgccggtcgggaacgcctcccaggacagagca
atcatcataacagacggggagtctggtgttatgagacgccccatctccagctcgccgccg
gtcttcatgagcaacgaggagttacttaaggagttgcactacttgagaaacgaagcaaga
gaacagcaagcgctcagagagcgagtcgctcaactggagtcccttgttcccggaacacat
cgttcagggaagcagccctttgaggaggaaagtcagtcaggccatcgcgatgatagaagg
cctgtgattgttccacgaaacttattcgcgtcgggcggccagactaccgccggaggagag
ggcgccagggacggaggaagacccccgcaagatagacgagcgaccgcacatctggaggag
gccagtcgggatgttaacgctctggcggaaagatacagaggaagagtcagtagggcggat
cttttggccctgatcaaagatcttgaaagcagacctgaatatgcgagtaccgggtcaaga
acggcaggcacgggtcgagaaggacataggaaggagattccgcatggatcagactcaaga
agctatgacagatcgcaagaacaagaaccccgtggtttgggaggaagatcggagcgagac
ccgatcgtgcttgaaggacggcagagtcagggaggaacgcgcgagcatgcgacgtctccg
ggcaacggaaagactcatcatcaggcaaatcttgatcagaccattgccgatccgcacatt
caagcctcgtctcaggccaatgctcatgccaatccgcatattcaagcctcatctcaggcc
aatgcgcccccatctgctcagactcacgctaatcaatccaatcctctcgccacggcaaat
gacctcatggctaccggaacactaccatcaatgactctgtcacagccaaacgttcagacc
attccaggcatcggagctattgatgtcaacagcctaaggaaacttctggcacatttcgac
ggaagccaaacgtctctttcaagccaagccctatcaccattctctgctgaagttatagag
gctccgctgccagccaattacagaaacaccacctccgatctaaagtttcatagtaactca
gatgctgtagagtttcttgggaggttcaatgttgagatgggtgtctaccagataccagac
cctgtcaggtgtagacttcttgcggcaacattcagagacagcgcctaccaatggttccgg
aaattggaaccagcatccatcacttcttggacaagcatgcagactatgttcttgactcag
ttccaggcaaccgtcaagtacgctccaccagtcaccactctggcaaatatcaaacaaaag
gaaggagagactcttcatgcctacttcaaacgtttcaatgcagagtcatccaacgttcgg
ggggcaactgatgagacactgaaaagcttcttggtggctgggcttcgagtaggaactgat
ttttggaagcacttgcaaggcaatgatcccaagtctctggcagatttatatgcaagggct
gaggcatacaaaaatgttgaacagtcactggctgagagtcgaaaaaatgagagaagccct
ggtaaggcccgacaaaagagaagggatcggtccccaagtccagaacaaagggggaggcga
cgaagtcccaaccgggtcaacaccatgtatagaaggaactacacacctcctcgagatcat
gaagaaagggaagatcgctggacaccgcttgccgcgccaattgatcacatcttcgaagtt
aaccgtgacaagggactcttccgcaggccagctcccctaaattcttggcaatccaagaat
aaggacaagtactgtgagtaccacgaatcaaccgggcatgatacccatgaatgtagacaa
ctgaaagaagagatcgagttgctaatcaaagaagggcagcttaatgaatggataatgcga
gaagcccggtcccgacgggatattcgagccaaggacagaagggggctcggctatactggc
gatcaagaaagaggaaagcaagaggacatccagttcgttaaggagggaagcattcatgtc
atctttggaggaccacatttggccggtgaggggaccagggctatggagagatatgcaaag
gaagcaaaagaagaagatgccagatgggttcaccacccgcacaatgatgccctggtgatc
gcccttcgtattggtccaatgaatgttcatcgtgtgctcgttgataacggaagctctgtc
aacattctttattatggcacctaccagaagcttggcctccctgataaggatatgaaagtt
gaggatgtctatatttatggatttggtggagaggctgtaaaggaaaaaggggagacatct
ggaaccaaagaggagtctgatctagacccaaggttgcccctagagtcagctaagaccggt
ctagctgaagataccgttgaaatccaggttggggaggccagagaggccaaaatattaaag
atagggtctaagctgaaaggagagttgaaggcaagccttatccgtttcttaagaagcaac
ttggatgtttttgcttggtgtcatgctgatatggtagggatcgacccagaagtaatgagt
caccatttaaacattgaccctaccaagaaagggatgagacagaagagaaggcctgttagt
ggagaaagggcccaagcactaaaggaagaggttgaccggttgttgggtgctaagctgatc
aaggagtcgttctaccctacatggctggctaacccggtccttgtcaagaagcctaatggg
aagtggagaacctgtgttgatttcacagatctgaacaaagcatgcccaaaggatagtttc
ccactcccaaggatagaccagttggtggatgccacggcaggaaacgctctgttaagtttc
atggatgcctattcagggtacaatcagatacccatgcatgaaccagatcaggagcacact
tcattcataactgacagaggcttatattgctatatagggatgccattcggactaatcaat
gcaggcgcaacttaccaacgccttgtaaacatgatgtttaaggagaagatcggtaagact
atggaggtttatgtagatgacatgctggtcaagtccaaggaggcgcgagatcacgttcgg
cacttggctgaaatgtttgacatacttaggaagtatcgaatgaagctgaatccccagaag
tgtgtatttggggttgagtctggtaaattcttggggttcatggtaaaccatcgagggatc
gaggctaaccctgcgaaaataaaagcattacttgatatgaagtctcctcagaatgtgagg
caggttcagagccttacagggatgatagcggcattgaatagatgtgtgtccaaatcctca
gacaggtgcaaggagttctttaaagcaatcaaggaagccggacagacattcttatggaca
gaagagtgtgagggggccttccaaaagataaaggagcaattgggaaagccacctctcttg
gccaagcccagtgaaggagaaacattgatcctatacctggctgtttcaagatactcggtc
agcgccgttcttgtgaaggaggagaaggatgtccagttcccggtgtattatgtgagcaaa
aggttacaggacgctgagacaagatacaccagcatggaaaagttggtatattctttgata
ttagcggcaaggaagcttcgtccatactttcaggcacacaagatagaagtaagaacctca
tatcctctacgtcagattatgcataagcctgaagccacggggagactcatgaagtgggct
gttgagctaggacagttcggtgaaggaggagaaggatgtccagttcccggtgtattatgt
gagcaaaaggttacaggacgctga
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