Daucus carota (carrot): 108196293
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Entry
108196293 CDS
T05350
Name
(RefSeq) myosin-8-like isoform X1
KO
K10357
myosin V
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108196293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108196293
04131 Membrane trafficking [BR:
dcr04131
]
108196293
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108196293
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108196293
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
108196293
mRNA cycle factors
P-body specific factors
108196293
Membrane trafficking [BR:
dcr04131
]
Others
Actin-binding proteins
Myosins
108196293
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
108196293
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108196293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Leu_zip
Ntox1
AAA_16
DUF3287
CC149
AAA_22
CbiA
nSTAND3
FapA
Lzipper-MIP1
Jnk-SapK_ap_N
KASH_CCD
ABC_tran
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
108196293
NCBI-ProteinID:
XP_017219006
LinkDB
All DBs
Position
7:12009700..12048411
Genome browser
AA seq
1386 aa
AA seq
DB search
MQHHRFSRYNTSIVSKWFLWLCLVIRVLFVLDFREMTTSKTVVVGSHVWVDDPEVAWKDG
DVTEVRGDVITVRCTSGEKVVRKISTIFPKDTELPSNGVDDMTKLTYLDEPGVLQNLSCR
FGVNEIYTYTGRILIAVNPFQRLPHLYEKDLMKQYKGAALHDLSPHPFAIADSAYKKMID
EGISQSILVSGESGAGKTESTKMLMQYLAYMGGKAAADGRSVEQQVLQSNPVLEAFGNAK
TVRNNNSSRFGKFVEIQFNDRGKISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPP
EDAERYKVGNPRTYHYLNQSKCIELDAMDDSKEYVETKRAMNVVGIGPDEQDAIFRVVAA
VLHLGNIEFKKGGDSDSSTPKDDQSRLHLKTAAELFMCDEKSLEDSLCKRVIVTRGEAIT
KHLDPAAAAISRDALAKTVYSRLFDWIVKKINDTIGQDPGSKYLIGVLDIYGFESFKTNS
FEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEAIDWSYIEFVDNQDILDLIEKKPGGIIA
LLDEACILPRSTHKTFAEKLYQTFSSHKRFKKPKFSQTDFTICHYAGDVCTSVHRSCVTY
QSEFFLDKNKDYVIGEHQDLMSASRSPFVSGLFPPLPVQSSNKSKFSSIGSRFKQQLQSL
LETLSATEPHYVRCIKPNNLLKPGIFENKNALHQLQCGGVMEAIRISRAGFPTRKTFDEF
KTRFRLLEPDILGGRYDEVTACKKLLEKTGLKGYQVGKTKVFLRAGQMAELDAHLTELLG
KSAIIIQSKFRSYHAHRDFTRLRFCVIPFQTYCRRQVARQRYETAKRLVQSAINIQAGIR
GMSARLNFRTRKQTKAAKMQVAKGTGPPQAASAKIKLEPKSNLEPKSKLDPKSNLEPKSK
LEQEVEELTGQLQLEKRMRAEETEKLKSDLEKMRLQFQGGKVSGFPIGASDNEVINALTA
ENEKLKSQVNTLENRIIQLKTDMQRLEEKLSDIEVEGHVLRQQTVQTGSPTAEGQEHIED
LIRCVTKNVGFSQKKPVAAVTMFRCLMQWKSFEADRSRVFDILIQMIGSKIEDEGDNELI
IYWYSNTSTLLFLLQRSFKTKTQPTGFFGRMTQGFLSSPSDVGGTQEVEPKYPAIRFKQQ
LTAYVEKIYTIVRNNLKKELSPSLDYFTQPSLKLPDDSPDKHWDSILHTLKKSLRTFKDN
YVHPVLVQKIFTQTFSYINVKIFNSFLLHQECCSLVNGEFLEAGLGVIELWCDQAALYAG
SSWDELTHIRQAVGFLAMQDKSKVTYTDLTNNLCPGLSVQQLHRICTLVNSNGKKANSCV
SADIFSQMKKIMTADVDVNSLLLDDNSSIPVTVDELNDPTTKVEGISDVEPPSELVELEA
FKFLKG
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccaccgcttttctcgttataatacgtccattgtctctaaatggtttctatgg
ctctgtctcgtaattagggttttattcgtcctcgatttccgagaaatgactacctcaaaa
actgtggtagttggatctcatgtatgggtggatgatcctgaggtcgcttggaaagatggg
gacgttacggaagttaggggtgatgtaattacagtaaggtgcacatcaggagaaaaggtt
gtacgtaaaatatccactatctttcccaaagatactgagctcccttcaaatggtgtcgat
gatatgacaaagttaacttatttggatgagcctggtgttttgcagaatctaagctgccga
tttggtgtgaatgaaatatatacttatacaggccgtatactgattgctgtaaaccctttt
caaagactgcctcatttatacgaaaaggatttgatgaaacaatataaaggggctgcttta
catgatctgagtccacacccttttgctattgcggattctgcctacaagaaaatgatcgat
gagggaataagccagtcaattttggttagtggagaaagtggagccggtaaaacagaaagc
accaaaatgcttatgcagtatcttgcatatatgggagggaaagctgcagccgatggacgg
agcgttgagcagcaagtcctacaatccaatcctgttcttgaagcatttggtaatgcaaag
actgtgagaaacaataactcaagccgctttggtaaatttgttgagattcagttcaatgat
cggggaaagatctctggcgctgctatcagaacttatctgttggaaagatcccgtgtttgt
caggtttcagatccagaaagaaattatcattgcttctatatgatttgtgctgcaccgcct
gaggatgctgaaaggtacaaggtaggcaatccacggacataccattatctgaatcaatca
aaatgcattgaattggatgcaatggatgattctaaggagtatgttgaaacaaaaagggcc
atgaatgttgtgggaattggtccagatgaacaggatgcaattttccgagtggtggcagct
gttctccacttaggaaatattgagttcaaaaagggtggggattcggattcttctacacct
aaggatgatcaatctcggttacatttaaaaactgcagctgagctatttatgtgtgatgag
aagtcactagaagactccttgtgcaaacgtgtgatagtaactaggggtgaggccataacc
aaacacctagacccggccgctgctgcaatcagcagagatgctttggcaaaaactgtttac
tcgagattatttgattggattgtgaagaagattaatgatactattggtcaagatcctggc
tcaaaatatttgattggggtattggatatctatggatttgagagtttcaagacaaacagc
tttgaacaattttgtatcaatctaaccaatgaaaaacttcaacaacacttcaatcagcat
gttttcaagatggaacaagaggagtacaaaaaagaagctattgactggagttatatagag
tttgttgacaatcaagatattcttgatctcattgaaaagaaacctggaggaataattgct
cttctggatgaggcttgcattttgcccagatcaacacataaaacgttcgcagaaaagttg
tatcaaaccttcagctctcataaacgtttcaaaaagccgaagttttcacagactgatttt
acgatatgccattatgctggtgatgtatgtacttctgttcataggagctgtgtcacttat
cagagtgaatttttcctggataaaaataaagactatgttataggagagcatcaagatctt
atgagtgcttccaggagtccctttgtatcaggactgttcccacccttacctgtacaatct
tccaataaatcaaaattttcgtcaataggttcccgattcaagcaacaactccagtctttg
cttgagacacttagtgctacagagccacactatgttcgttgtataaagccaaacaatctt
ctgaagcctggtatctttgagaataaaaatgcactacatcagcttcaatgtgggggagtc
atggaggcaataaggatcagtcgtgctgggtttccaacaaggaaaacgtttgatgaattc
aaaacaagatttagattacttgaacctgatattttgggtggaagatatgatgaagttact
gcttgcaagaagctcttggagaagacaggccttaagggctaccaggttggcaagacaaaa
gtatttcttcgagctggtcaaatggcagagctagatgctcatcttactgaactcttggga
aaatcagcaattatcatccagagcaaatttcgttcataccatgctcatagggactttaca
agattgcggttctgtgtcataccattccaaacatattgcagaaggcaagtagcacgccag
agatatgagactgccaaaaggttggtgcagtcagctattaacattcaagctggaatacgt
gggatgtctgctcggcttaattttcggactaggaagcaaactaaagcagcaaaaatgcag
gttgctaaaggaactggtcctccccaagctgctagcgctaagattaaattggaacctaag
agtaacttggaacctaagagtaaattggaccctaagagtaacttggaacccaagagtaaa
ttggaacaggaagttgaggaactgactgggcaattgcagttagagaaacgcatgagggca
gaagaaactgaaaagctgaaatctgatctggaaaagatgcggcttcagtttcaaggaggc
aaagtttctgggtttccaattggtgcaagtgataatgaagtcattaatgcactaactgct
gaaaacgagaaactcaagtcccaagttaatacactggaaaacagaattattcagctgaag
acagacatgcaacgacttgaagaaaaactgtctgacattgaggtggagggtcacgtccta
cggcaacaaacagtacaaactgggtcaccaactgcagaaggccaggaacacattgaagat
cttataagatgtgttacgaaaaatgttgggtttagtcaaaaaaaaccagttgcagcagtt
accatgttcagatgcctcatgcagtggaagtcttttgaagcagatagaagtagagtattt
gatattcttattcagatgattggttcaaaaattgaggatgagggtgataatgagcttata
atttattggtattccaacacatccacgttactctttttacttcaaagaagcttcaagaca
aagacccaaccaacaggtttctttggaagaatgacacagggcttcctatcatctccttca
gatgttggggggacgcaagaagttgagcccaagtatccagcaatacgttttaaacagcaa
cttacagcttatgttgaaaagatatatacaattgttaggaacaatctgaagaaggaattg
tcaccatctcttgattattttactcagccgagtttaaagcttcctgatgatagtccagat
aaacactgggacagtattcttcacactttaaaaaaatctttacgtacattcaaagacaat
tatgtgcatcctgttcttgtacagaaaatatttactcagacattttcctatattaatgta
aagatatttaatagttttcttcttcatcaagaatgttgctcgctagtcaatggggaattt
ttggaggctggcttaggtgtaatagaactttggtgtgaccaggcagctttgtatgcaggc
tcatcatgggatgaattaactcacataaggcaggctgttggatttttggctatgcaggat
aaatcgaaagtcacctacactgatttaactaataatctatgcccgggtttgagtgttcag
caactgcatagaatatgtacgcttgttaacagcaatggcaagaaagctaattcatgtgta
tcggcagatatattttctcaaatgaaaaaaataatgaccgccgatgttgatgtcaactca
cttttgttggatgataattctagcattcctgtcacggttgatgaactcaatgatccaaca
actaaagtggaaggtatctctgatgtggaacctccttcggaacttgtagagttagaagct
ttcaaatttttaaaggggtaa
DBGET
integrated database retrieval system
