Daucus carota (carrot): 108202326
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Entry
108202326 CDS
T05350
Name
(RefSeq) calcium permeable stress-gated cation channel 1-like isoform X1
KO
K21989
calcium permeable stress-gated cation channel
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108202326
Transporters [BR:
dcr02000
]
Other transporters
Pores ion channels [TC:
1
]
108202326
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Motif
Other DBs
NCBI-GeneID:
108202326
NCBI-ProteinID:
XP_017226203
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Position
9:30817644..30827679
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AA seq
772 aa
AA seq
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MATFGDIGLAAAINIITALIFLIAFAILRLQPFNDRVYFPKWYLKKLRESPSRSGTFVSK
FVNLDIKSYVKFLKWMPDAFQMPELELIDHAGLDSVVYLRIYLLGLKIFFPIMLLAWAIL
VPVNVTNDTLENTKGVTFSNIDKLSISNIPLGSDRFWTHIVMAYAFTFWTCYVLKMEYEK
IQDMRLHFLASEKRRPDQFTVLVKNVPPDSDESVSELVEHFFLVNHPDHYLTHQVVCNAN
KLAELVEKRKKMRNWLDYYQIKYSRNQSKRPMKKTGFLGLWGAKVDSIDYYTSKIEKLSK
EIAAERESVTNDPKAIMPAAFVSFKTRWAAAVCAQTQQCRNPVMWLTEWAAEPRDVYWPN
LAVPYVQLTVNRLIVAVAFFFLTFFFMIPIAMVQSLANIEGIEKAAPFLKPVIEADFIKS
FIQGFLPGIALKIFLILLPTILMIMSKFEGWLSISALERRSASRFYMFNFVNVFLGSIVA
GAAFEQLHTFIHQSAQDIPTTIGVAIPMKATFFITYIMVDGWAGLAGEILRLKPLIFYHL
KNTFLVKTEKDREEAMDPGSLGFDTGEPQIQLYFLIGLVYAVVTPLLLPFILIFFAFAFV
VFRHQIINVYNQEYESAGAFWPDVHGRIIGALVISQLLFMGLLSTKEKAQSTPVLIVLPV
LTIWFHRYCKGRYEPAFVKYPLQEAMMKDTLERAREPNLNLKGYLQNAYIHPVFKSCDDS
DSDDDMIEVHEKWEQELVPTKRQSRRNTPAPSKMSGGSSPSMHEVFPEYSKP
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggctacatttggggatattggacttgcggcagctatcaatatcatcactgcgctgatc
tttctcatagcttttgccatactaagacttcaacctttcaacgatagagtttattttccg
aaatggtatcttaagaaattaagagaaagtccatcaaggtctgggacatttgttagcaag
tttgtgaatttagatatcaaatcatatgtcaagtttctcaagtggatgcctgatgcattc
caaatgccagaactcgagcttattgaccatgcaggattggattctgttgtgtacttaagg
atttacttgcttgggctcaaaatatttttcccaataatgttgctggcatgggctatcctt
gtcccagtcaatgttacaaatgacactttagagaataccaaaggagtaacattcagcaat
attgataaactttctatttcaaacatcccgctagggtcagacaggttttggactcatata
gtgatggcctatgccttcacattctggacctgttatgtgctaaaaatggagtatgagaaa
attcaggacatgcgattgcactttctggcatcagaaaagcgcagaccagatcagtttaca
gttcttgtaaagaatgtaccaccagattctgatgaatcggtgagcgagcttgttgagcac
tttttcttggtcaaccatcctgaccactatctcactcatcaggttgtgtgcaatgcaaat
aaactggctgaactagttgaaaaaagaaaaaaaatgcggaattggctcgactactaccaa
ataaagtattctagaaatcaatcaaaacgtcccatgaagaagactggttttctaggactt
tggggagcaaaagtggattcaattgactactacacctcaaaaatagagaaattgtctaaa
gaaatagctgcagagcgagaaagtgtaacaaatgatcctaaggctattatgccagcagca
tttgtctccttcaaaactcgttgggctgctgcagtctgtgcccagacgcaacaatgtaga
aatccagttatgtggttaacagagtgggctgcagagcctcgtgatgtatattggccaaac
ctggcagttccgtatgttcaattgactgttaacagactaatagttgcagttgcgttcttt
ttcttgacattcttcttcatgatccctatagccatggtgcaatcacttgcaaatattgag
ggtattgagaaagcagcaccatttttgaagcctgtaattgaagccgattttatcaagtca
tttatacaaggttttctacctgggatagcattgaagatcttccttatactcttaccaact
atattgatgataatgtccaagtttgaaggatggctgagtatttccgctttagagaggaga
tccgcgtccagattctatatgtttaactttgtaaatgttttccttgggagcatagttgca
ggagctgcatttgaacagctacatacttttattcatcagtcagcacaagatatccctaca
accatcggtgtggctatccctatgaaagcaactttcttcataacatacataatggttgat
ggatgggctggtctagctggagagatattaaggttaaaacccctgatattctaccactta
aagaacaccttcttagtgaaaactgaaaaggatcgagaggaggcaatggatcccggaagt
ctgggtttcgacactggggaacctcaaatacagttgtactttctaataggccttgtctat
gccgttgttaccccactgctgctcccttttatactgattttctttgccttcgcgtttgtt
gtatttcgtcatcagatcataaatgtctacaaccaagagtatgaaagtgctggggcattt
tggcctgatgtccacggacgtataattggtgcattagtaatctcccaactcctctttatg
ggcttattgagtaccaaagaaaaagctcaatcaacaccagttctcatcgtgcttcccgtt
cttaccatatggttccatcggtactgcaaaggtcgctacgaacctgcattcgtcaagtac
ccattgcaggaagccatgatgaaagatactttggagcgagcaagggagccaaatctgaac
ttaaagggctaccttcagaatgcttacatccaccccgttttcaaatcttgtgatgattca
gactcggatgatgacatgattgaagtgcatgagaaatgggagcaagagctggtgcctaca
aaacgacagtcacgaagaaatacaccagctccaagcaagatgagtggtggttcttcccca
tccatgcatgaggtttttcctgaatattccaaaccttaa
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