Daucus carota (carrot): 108220064
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Entry
108220064 CDS
T05350
Name
(RefSeq) calcium permeable stress-gated cation channel 1-like
KO
K21989
calcium permeable stress-gated cation channel
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dcr02000
]
108220064
Transporters [BR:
dcr02000
]
Other transporters
Pores ion channels [TC:
1
]
108220064
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
SpoIIE_N
Motif
Other DBs
NCBI-GeneID:
108220064
NCBI-ProteinID:
XP_017249197
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Position
5:41514442..41522296
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AA seq
769 aa
AA seq
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MATLSDIGVAASINILSALAFFIAFSVLRIQPFNDRVYFPKWYLKGLRNDPLQTSALVQK
ILNLDWKSYLSFLNWMPAALKMPEPELIDHAGLDSAVYLRIYRTGLKIFIPIAVAAFSII
VPVNWTNRTLEHSNLTYSTIDKLSISNIPIGSIRFWTHLVMSYAFTLWTCYVLKQEYEIV
ASMRLHFLASEHRRPDQFTVLVRNVPPDPDESVGQLVEHFFLVNHPEHYLSNQVVYNANI
LSGLVDEKKKRQNWLDYYQLKYTRKLSKRPTMKTGLLGLWGKKVDAIQYYTSKIEKLSEE
IFSERLKMAKDPKFIMPAAFVSFKTRWAAAVCAQTQQSRNPTVWLTEWAPEPRDVYWDNL
AIPFVSLTIRRLVVAVAFFFLTFFFMIPIALVQSLANLDGIEKAAPFLKPVIEVKAVKAF
IQGFLPGIALKFFLIFLPSILMLMSKFEGFSSISKLERRSASRFYVFQFVNVFLGSIIAG
TAFQQLNNFIHQSANEIPKTIGVSIPMKATFFITYIMVDGWAGVAGEILRLKPLIMYHLK
NFFLVKTDKDRKEAMDPGSIEFYTGEPQIQLYFLLGLVYAVVSPILLPFIVVFFALAFLV
YRHQIINVYNQEYESAAAFWPDVHRRIIVALIVSQLLLLGLLSTKEAAQSTPLLIALPVL
TICFHIFCKGRYEPAFLRYPLQEAKMKDILERTREPNLDLKEYLQRAYVHPVFKAGDDND
SDAQAQEWELKTTLVPTKRTSRKNTPVPSIKSSGSTGPLLSDVQGIPNP
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggctacactgtctgatataggggttgcagcatctattaatatcttgagtgcattagca
ttctttatagcgttttcagttctccggattcaaccatttaatgacagggtctattttcca
aaatggtacttaaagggtttaagaaacgatccactgcagacaagtgcacttgtacagaaa
attctaaatttggactggaagtcgtatttgagtttcctgaattggatgcctgccgcactg
aaaatgccagagcctgaacttattgatcatgcaggattggattctgcggtttacttgagg
atttacaggacagggcttaaaatatttattccaattgcagtggctgccttttcaatcatt
gttccagtgaattggacaaatcgcactcttgagcactccaatctaacttacagcaccata
gataaactatctatttcaaatattccaattggatcaattagattctggacacatttggtc
atgtcgtatgcttttaccctctggacatgctatgtgctgaagcaggagtatgaaattgtt
gcatcaatgaggttgcattttcttgcatcagaacatcgtcggccagatcaattcactgta
cttgtaagaaatgtgccaccagatcctgatgaatcggtaggtcaacttgtggagcacttc
ttcttggtcaaccatccagaacactatctcagcaatcaggttgtgtataatgctaacata
ctgtcgggacttgttgacgagaagaagaagaggcaaaattggctagactattatcaactg
aagtataccagaaaactgtcaaaaagaccaactatgaagactggactgcttggcctttgg
ggaaagaaagtggatgcaattcaatattatacatcgaaaattgaaaaactctctgaagaa
attttttcagaaagattgaaaatggccaaggatccgaaattcatcatgccagccgcattt
gtttcattcaaaacgcgatgggctgctgctgtttgtgcacaaactcaacaatctagaaat
ccaactgtctggttaactgagtgggcacctgaaccccgtgatgtgtattgggataacctg
gcaattccatttgtctccctcacaataagaaggcttgttgttgccgttgctttctttttt
cttactttcttcttcatgatacctatcgcacttgtacagtctcttgcaaaccttgacgga
atagagaaagcagcaccgttcttaaagcctgtgattgaagtgaaagctgtgaaagcattc
attcaaggtttccttccgggaattgctttgaaattttttcttatatttctaccatcaata
ttgatgctgatgtccaaatttgaaggctttagctccatatcaaaactagaaaggagatcc
gctagtagattctacgtttttcaatttgtaaatgtttttcttgggagcataatcgcagga
actgcatttcaacagctaaataatttcatccaccaatcagcaaatgaaatcccaaaaact
ataggagtctccatccccatgaaagcaactttttttataacttacataatggtagatgga
tgggctggagttgctggggaaattctgagattgaagccactgataatgtatcacttgaaa
aatttcttcttggtgaaaactgataaggacaggaaagaagccatggacccaggaagcatt
gaattttatacaggggaacctcaaatacaactttatttcttactcggtcttgtctatgct
gttgtgagcccaattttacttcccttcatagtagtgttctttgccctggcgttccttgta
tatcgccatcagattataaatgtctacaatcaggaatatgaaagtgctgcagcattctgg
cctgatgtccataggcgtattatagtggcgttgatcgtctcacaattgcttcttttggga
ttgttgagtacaaaagaagcagctcagtcaaccccattgctcattgcactcccagtactg
acaatttgtttccacatattctgcaaaggtcgttatgaaccagcttttctccgatatcca
ctacaggaagcgaagatgaaagatatattggaacgtacacgagagccaaacctggacttg
aaggaataccttcaaagggcttacgtccacccagtcttcaaggctggagatgataatgat
agtgatgcacaagctcaagaatgggaattgaagactactcttgttcccacaaaacggact
tcacggaaaaatactccggtccctagcataaagagctcaggctctactggacccttatta
tctgatgttcagggaattccaaatccataa
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