Dyella caseinilytica: ISN74_12020
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Entry
ISN74_12020 CDS
T07062
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
dcs
Dyella caseinilytica
Pathway
dcs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dcs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ISN74_12020 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcs03400
]
ISN74_12020 (recB)
Enzymes [BR:
dcs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ISN74_12020 (recB)
DNA repair and recombination proteins [BR:
dcs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ISN74_12020 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
AAA_25
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QRN52218
LinkDB
All DBs
Position
2786850..2790503
Genome browser
AA seq
1217 aa
AA seq
DB search
MNEIAPLDPLRLPLQGIRLIEASAGTGKTWTLAALYVRLVLGHGGQPPQLPAQILVVTFT
RAATAELRERIRERLATAAASFRGQRSADDFLQRLIAEYPGAEERAAAARQLDLAAQWMD
EAAIYTIHGWSQRMLAQHAFEGNEGIDEVADESARLAEAVRDYWRRFYAPIDEAEAACIA
TQWRSPQVLQRAVRPLLRQPIQHVRIQGQPLPPVEDLADALRKHHAPRREAEQVARGLWH
ADIDGIESLLRTAVQTKALKNNIFIPKTVERELIALAEWAQGYAIEKTVLVRYTQKKLDS
AVSKGSTTPTHAAFDAIETLLDTWEAEPPLKPLLLAHALPWIAARVDQIRQRQAKPGFDD
MLRQLDAALHSSHGAQLADTIATQYPVALIDEFQDTDPLQWQIFQRIYADRPDTGLLLIG
DPKQAIYSFRGADIHTYLTAREQAQSPTWTLTANYRSTSPLVDAVNRVFRYADQWPSGAF
AFGKGSHGLPFQPVMAAGAKRTLQYDGQPVTAIQLEVFPSDKPMNMGTYRDTASAYAAAH
IVDLLEAAQSGRCAFVDEDGKQTSLRPQDIAVLVRDRREALCIRNALWQRRVASVYLSEK
DSVYATEEAIDVLRWLQACAMPASDRLMRTALATATMQRNLVELDRLNNDEAYWDACGQR
FRDLQIVWQRHGVLAMLHNLLHAFDLPARLLAAPGGERALTNLQHLAELLQHAATNLDGE
YALIRHLAAHIARADEDDAETAEEQVVRLESEADLVKVITIHKSKGLQYPIVMLPFVSRF
RDVPKGAQPWHDEQGRTWVDLEPDEEARERVDHERLQEDLRLFYVALTRAEHACWLGVAC
VTEGQSRAAGLHRSALGYVLSGGEPIEPSDLPGRIDALRGDSPDMQVHIADEPAGIRMYH
PLHRPQSERQARIYTLPPPEPWWIASYSALTHSESGHAAQVAPDTAIQDVLQEAARESLE
WIAPAIDYGMHAFPRGAEAGTFLHDLLEWIAEAGFAAVAKDPTALEQQIARRCQRHGWQA
WISPLGQWLPALLQTPLALPDGHTLALADLDARTRYQAELEFWFEAHHVDTQQLDQVVTR
HTLNGLSRPPLPTNRLNGMLKGFIDLIVEQRGRYYVVDYKSNWLGETVAAYTPAAMRDAT
LQSRYDLQYAIYTLALHRQLRARLADYDYERHIGGVLYLYLRGIDHAGHGVHAERLPFAL
IDAMDRLFAQGARANVA
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagattgcaccgctcgatccgttgcgcctgcctctgcaaggcatccgtttgatc
gaagccagcgcaggcaccggcaagacctggacgctggcggccttatacgtgcggctggtg
ctgggccacggtggtcaaccaccgcaattgccagcacagattctggtggtgacattcacc
cgcgccgcgacggcggagctgcgcgagcgcatccgcgaacgccttgccactgctgctgcg
tccttccggggacaacggtcagcagacgatttcctgcaacgcctgattgctgaatatccc
ggcgcagaagaacgtgctgctgccgcgagacagttggatctggccgcgcaatggatggac
gaagccgccatctataccatccacggttggagccaacgcatgctggcgcagcatgcattc
gaaggcaacgagggcatcgatgaggttgccgacgaaagtgcgcggctcgccgaagctgtg
cgcgactactggcgccgcttttacgcgccgatcgatgaagcagaagcagcctgcatcgcc
acgcaatggcgcagcccgcaggtgttgcagcgtgccgtgcggccactactgcgccagccg
atccagcatgtgcgtattcaaggccagccattgccgccggtcgaagatctcgccgatgcc
ttgcgaaagcaccacgcgccacggcgcgaggcggaacaggtggcacgtggcttgtggcat
gcagacatcgacggcatcgagtccttgcttcgcaccgccgtgcaaacgaaggcgctgaag
aacaatatcttcattccgaagacggtggaacgcgaactgatcgcactggccgagtgggcg
cagggttacgccatcgagaagaccgtgctcgtacgttatacgcagaaaaaactcgatagt
gcagtaagcaaaggcagcaccacgcctactcatgccgccttcgatgccatcgagacgttg
ctcgatacgtgggaagccgaaccaccactcaaaccgctgctgctcgctcatgcattgcca
tggatagcagcgcgcgtcgaccagatccgccaacgtcaggccaagcccggcttcgacgac
atgctgcgccagctcgacgccgccctgcacagctcacatggtgcccagcttgcagacacc
atcgccacacaatatccagtcgcattgatcgacgaatttcaggataccgatccgctgcag
tggcaaatcttccagcgcatttacgcggaccggcccgataccggcttgctgctgatcggc
gatcccaagcaggccatctatagtttccgcggcgcggacatccatacctatctcaccgcg
cgtgaacaggcgcaatcgcccacctggacgctgaccgccaactaccgctccacctcgccg
ctggtcgatgcggtgaatcgcgttttccgatatgccgatcaatggccatccggcgctttt
gcattcggcaagggatcgcacggcttgcccttccagcccgtgatggccgcgggtgcaaaa
cgcaccttgcagtacgacggccagcccgtcacggccatccagttggaggtatttcccagc
gacaagccgatgaacatgggcacctaccgagatacagccagtgcctacgctgcagcccac
atcgtcgatttgctggaggccgcgcaatcagggcgctgcgcgttcgtcgacgaagacggc
aagcaaacttcgctgcgcccacaggacattgctgtgctggtgcgcgatcgcagagaagct
ctctgcatacgcaacgcgctgtggcagcgtcgcgtggcaagcgtctatctgtcggagaaa
gattcggtctacgccaccgaagaagccatcgacgtgctgcgctggttgcaagcctgcgcc
atgccggcctccgaccgcctcatgcgcacagcgctagccaccgccaccatgcagcgcaat
ctggtagaactggatcgtctgaataacgatgaagcgtactgggatgcatgcggccagcga
ttccgcgatctgcagattgtgtggcaacggcacggcgtgctggcgatgctgcacaactta
ctacacgcgttcgacctgcccgcgcgcctgctcgccgccccgggtggcgagcgcgcactg
accaatctgcaacacctggcggaactgctgcaacatgcagcgacgaatctggatggcgag
tacgccttgatccgccatcttgctgcgcacatcgcgcgcgccgacgaggacgatgcggaa
acggccgaggaacaggtggtgcggctggaaagcgaagccgacttggtgaaagtgatcacc
atccacaaatcgaagggcttgcagtatccgatcgtgatgctgcctttcgtcagccgcttc
cgggatgttcccaagggtgctcagccatggcacgacgaacagggacgcacctgggtcgac
ctggaacccgatgaagaagccagggaacgcgtggatcatgagcgcctgcaggaagatctg
cgccttttctacgttgccctcacccgcgccgaacatgcctgctggctgggcgtcgcatgc
gtcaccgaagggcagagccgcgccgcggggctgcaccgttccgcactcggctacgtgctt
tcgggtggcgagccgatcgaaccgagcgatctcccggggcgcatcgacgcgttgcgtggg
gattcgcccgatatgcaggtgcatatcgcagacgagcctgctggcatacgcatgtaccat
ccgttgcatcgcccacaaagcgagcggcaagcgcgcatctataccctgcctccacccgaa
ccctggtggatcgccagctacagcgcactgacacacagcgaaagcgggcacgccgcacag
gttgcgccagacactgccatccaggatgtactgcaggaagccgctcgcgaatcccttgag
tggatcgctcctgccatcgattacggcatgcacgcgttcccgcgcggcgcagaagctggc
accttcctgcacgacttgctggaatggatcgccgaggccggctttgccgcagtcgccaaa
gatcccacggcactcgaacaacaaatcgcacgccgctgccagcgacacggctggcaagcg
tggatatcgccactcggccaatggttgccagccttgctgcagacaccactggcattgccc
gatggccacacgctggcgcttgcggatcttgatgctcgcacgcgctaccaggcggaattg
gaattctggttcgaagcgcatcacgtcgatacgcagcagctcgatcaggtggtgacacgt
cacaccttgaacggactatcccgtcctccgcttccgaccaaccgcctcaatggcatgctc
aaaggctttatcgaccttatcgtcgaacagcgtggccgttattacgtggtcgactacaaa
tccaattggctgggtgaaaccgtagcggcttacaccccggcagcaatgcgcgatgccacg
ctgcaatcacggtacgacttgcagtacgccatctatacgctggctctgcatcgacaattg
cgcgctcgcctggccgattacgactacgaacggcatatcggcggggtgctttatctgtac
ttgcgcggcatcgaccacgctggccatggcgtacatgcggaacgcttgccgtttgcattg
atcgatgcaatggatcgcctgtttgcacaaggagcacgcgccaatgtcgcataa
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integrated database retrieval system
