Dictyostelium discoideum (cellular slime mold): DDB_G0273203
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Entry
DDB_G0273203 CDS
T00245
Symbol
snf12-1
Name
(RefSeq) CHC group protein
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Pathway
ddi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DDB_G0273203 (snf12-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ddi03021
]
DDB_G0273203 (snf12-1)
03036 Chromosome and associated proteins [BR:
ddi03036
]
DDB_G0273203 (snf12-1)
Transcription machinery [BR:
ddi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
DDB_G0273203 (snf12-1)
Chromosome and associated proteins [BR:
ddi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
DDB_G0273203 (snf12-1)
PBAF complex
DDB_G0273203 (snf12-1)
GBAF(ncBAF) complex
DDB_G0273203 (snf12-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DOT1
Motif
Other DBs
NCBI-GeneID:
8618873
NCBI-ProteinID:
XP_644771
dictyBase:
DDB_G0273203
UniProt:
Q556Z0
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All DBs
Position
2:complement(2700893..2702467)
Genome browser
AA seq
456 aa
AA seq
DB search
MSKNGTTGNKKKKTKLSTAATIAANIAKANATLNNNNNSNNNSNNTNIGNSINGIPSSLP
PSVTLPVEELISFAPECLLFSQLLEFEEKLDASINKRLIDIQEASRRNSIKNIRTLRLSI
YNTYSNQSAYYHLDNKSLNSVQERPSWSLRVEGKLLDESQDELVNKSIKSSSSSSSTANK
RKFSSFFKKVFIQIGHRDTCEWDKSQTFTETDGFEIKRNGNQEVDIKILMYLDHVPQKYK
VLGGLSQLLNIHTDTKPRIILALWHYIKSNTLLDAETKKITCDENLKNIFSLEELQFNQI
PQLLREHLSPPDPLEFQYTLHLSGDAKDYEQAYDIQVEVDEPIFNPNPTMRKEISQLNDE
INHHIQKVYQHKRKREFMEKLSSDPLGFLNDTTANLVKDFQVSKSTTSTGFEEERHASFY
YQPMTEELVKNYLSKQTTPNPTPQQISMAPSTPQTP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatggtacaactggtaataaaaaaaagaaaacgaaattatcgacagcagca
acaattgcagcaaatatagcaaaagcgaatgcaacattaaataataataataatagtaac
aataatagtaataatacaaatataggtaattcaattaatggtataccatcatcattacca
ccatcggttacattaccagttgaggaattaatttcatttgcaccagaatgtttactattt
tcacaattattagaatttgaagagaaattagatgcatcaatcaataaaagattaattgat
attcaagaagcgtcaagaagaaacagtattaaaaacattcgtacacttcgtttatcaatc
tataacacatactccaaccaatctgcatactatcatttagataataaatcattaaattcc
gttcaagaaagaccatcatggtcattacgtgttgaaggtaaattattggatgaatctcaa
gatgaacttgtaaataaatcaattaaatcctcatcatcatcctcctcaacagcaaataaa
agaaagttttcatcattttttaaaaaggttttcattcaaattggtcatagagatacttgt
gaatgggataaatctcaaacttttactgaaactgatggttttgaaattaaaagaaatggt
aaccaagaagttgatattaaaattttaatgtatttagatcacgtaccacaaaaatataaa
gtattaggtggactttctcaattattaaatattcacacagataccaaaccaagaatcatt
ttagcattatggcattacattaaatcaaatacattattagatgcagaaacaaagaaaatt
acttgtgatgaaaatttaaaaaatatatttagtttagaagaattacaatttaatcaaata
ccacaattattaagagaacatttatcaccacctgatccattagaatttcaatatacatta
catttatcaggagatgcaaaagattatgaacaagcatatgatattcaagttgaagttgat
gaaccaatctttaatccaaatccaacaatgagaaaagagatttcacaattgaatgatgaa
attaatcatcatattcaaaaagtttatcaacataagagaaaacgtgaattcatggaaaaa
ttatcatctgatccattaggtttcttaaatgatacaacagcaaatttagtaaaagatttc
caagtttcaaaatcaacaacttcaactggtttcgaagaggaaagacatgcttctttctat
tatcaaccaatgactgaagaacttgtaaaaaattatctttcaaaacaaaccactccaaat
ccaactccacaacaaatttcaatggctccttcaactcctcaaactccttaa
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