Dictyostelium discoideum (cellular slime mold): DDB_G0277953
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Entry
DDB_G0277953 CDS
T00245
Symbol
ints6
Name
(RefSeq) initiation factor eIF-4 gamma middle domain-containing protein
KO
K13143
integrator complex subunit 6
Organism
ddi
Dictyostelium discoideum (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
ddi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ddi03041
]
DDB_G0277953 (ints6)
Spliceosome [BR:
ddi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
DDB_G0277953 (ints6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TFIIA
SR-25
CBP30
INT_SG_DDX_CT_C
Motif
Other DBs
NCBI-GeneID:
8621240
NCBI-ProteinID:
XP_642029
dictyBase:
DDB_G0277953
UniProt:
Q54Z23
LinkDB
All DBs
Position
3:56545..59868
Genome browser
AA seq
1107 aa
AA seq
DB search
MLITFVVDTSGSMSQKTTNGMTLLDCSKAAIEHFIKIRSKDASMRNDRFFLITSEENPIT
AVKIGWKDNFNSFIQEVKNLQTKDMSNLGFSLQKSFDFLNQFRVQSSIDNYGQGRNPWFI
EPAIIILLTDGSSLTNSSSIIENFTLPKTQFHLNSDPTSEPFRWDQRLFSIVLKFGGISS
NKSLPLPMEPAIAPMCDVTGGRCQVATNMKTMIQQVEGLMQKLQGGVVVSFEPLVNQQQA
QAQAQQLLPPPPLSLHKMLYVRQQVGFWPIPEGYYPDITSLSLPMRLAHPVIRYSIIEAD
THIPENFPFDKYELEPCPLTQYLLTNKIQCTHVFMMNSLQVSGQGEPFGCLRLNSAGNSV
NLFVFPYNFPRLWILLEDLTTTFKMMPSQKWKQEFEGYLLSIPPYYINPLRGALKRFCSL
NLIPDNIDSQFINFINNTIKKIKSQSISKMESERIINSKQQQQQQQQFSHQQQFQQFQQK
QAQQYDSSPSSPSSSPSSSSSNTSGIGSSSGSGNLATKKKSFHQILDQGYSSDILSELIQ
QDNETSENSELSQELSESSTTGSSGGGSSSNINILQRNVFDIGRVQLLNQLDKMKDHIFK
KKIQKDESKHHLPISQMGNYHETIGKRETLRDIDDDKKPNTPLFGNPYRKEKSNQRYMSI
DEADEGGNLTSDGEGKNKLTPNKRRRLSGRGYPSLPTLNSLSNTSTTTSTTTTTTTTTPA
TSTNTTITSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTITSSPPTTSTNPLLQ
PTTASITTSTVPIPSTTVSSPITNTSIITTNIHIQPTQISSPPPLSSSLAINQPTQTSSV
ISSSSSPPPPPPPPPLPIVNNNNVIPSSLVQVTNNNNNIPTVPVNNISPPTSTISSPNNQ
HLLPTPPNINNTSISTTNVPNISTTTSNESIISQPISPTHKNIAGVVRPFRPNSPPLTID
TLTSSSSSSTIPTTTNGSLSTHDTPNTSPTLSSINYNNNNNNNNNNNNNNNNNNNNNNNN
NNRKNSIITTTTPNNETNNIIKFVHKEIRRPTKDNHDIIIQQLSKLFSILSDGNLRLKLL
KDTINLAKEYKKSSLISKLIGYIDQIK
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgttaattacatttgttgtggatacaagtggatcaatgtcacaaaaaactacaaatgga
atgacattattagattgtagtaaagcagcgattgaacattttataaagattagatcaaaa
gatgcatcaatgagaaatgatagattctttttgattacatcagaagagaatccaataaca
gcagttaaaattgggtggaaagataatttcaatagttttatacaagaagttaagaattta
caaaccaaagatatgtcaaatttaggattttcacttcaaaaatcatttgatttcttaaat
caatttagagtgcaatcatcaatcgataactatggccaaggtagaaatccatggtttatc
gagcctgcaatcatcatactattgactgatggaagttcattaaccaacagctctagtatt
attgaaaattttacattaccaaaaactcaatttcatttaaatagtgatccaacgtcagaa
ccattcagatgggatcaaagattattctctatcgttttgaaatttggtggtataagtagt
aataagagtttaccattacccatggaaccagcgatcgcaccaatgtgtgatgttacaggt
ggtagatgtcaagttgcaaccaatatgaagacaatgattcaacaagtggaaggtttaatg
caaaagttacaaggtggtgtagttgtaagctttgaaccattggtaaaccaacaacaagca
caagcacaagcacaacaactactaccaccaccaccattatcattgcacaagatgttatat
gttagacagcaagttgggttttggccaataccagagggttattatcctgatatcacctca
ttatcactaccgatgagattggctcatccagtgatacgatatagtatcatcgaggccgat
actcacattccagagaatttcccattcgataaatatgaattggaaccatgtccattgaca
caatatctactcacaaataaaattcaatgtactcatgtattcatgatgaacagtttacaa
gtttcaggtcaaggtgaaccatttggttgtttacgtttaaactctgctggtaatagtgtc
aatctattcgtatttccttataatttcccaagactatggattttattagaggatttaact
acaacctttaaaatgatgccttcacaaaagtggaaacaagagtttgagggttacttatta
tcaataccaccctactatattaatccattaagaggtgctttgaaaagattttgttcttta
aatttaatacctgataatatcgatagtcaatttataaatttcataaataatacaattaaa
aaaataaaatcacaatcaatttcaaagatggaatctgaaagaattataaattcaaaacaa
caacaacagcaacaacaacaattctctcatcaacaacaatttcaacaatttcaacaaaaa
caagctcaacaatatgattcatctccatcatcaccctcatcatcaccatcatcctcctcc
tctaatacaagtggaattggtagttcaagtggtagtggtaatttagcaacaaagaaaaag
agttttcatcaaattttagatcaaggttattcaagtgatattttatcagaattaattcaa
caagataatgaaacatctgaaaattcagagttatcacaagaattatcagaatcttcaaca
actggtagtagtggtggtggtagttcttcaaatataaatattttacaaagaaatgtattt
gatattggtagagttcaattattaaatcaattagataaaatgaaagatcatatatttaaa
aagaaaattcaaaaagatgaatcaaaacatcatttgccaatatcacaaatgggtaattat
catgaaactattggtaaacgtgaaactttaagagatattgatgatgataagaaaccaaac
actcctctatttggtaatccctatagaaaagagaaatcaaatcaaagatatatgtcaatt
gatgaagctgatgaaggtggtaatttaacttctgatggtgaaggtaaaaataaattaact
ccaaataaaagaagaagattatctggtagaggttatccatctttaccaacattaaattct
ttatcaaatacatcaacaactacttctactactactactactactactactacaccagca
acttcaacaaatacaacaataacatcatcatcatcatcatcatcatcatcatcatcatca
tcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatcatca
tcatcatcatcaacaatcacatcctcaccaccaacaacatctacaaatccattattacaa
ccaacaactgcatcaataacaacttccacagtacctataccttcaacgactgtatcatca
cctataactaacacatcaataattactactaatatacatattcaaccaacacaaatatca
tcaccaccaccattatcttcatcattagcaataaatcaaccaacacaaacatcatctgta
attagttcatcatcatcaccaccaccaccaccaccaccaccaccactaccaattgttaat
aataataatgtaataccatcaagtcttgtacaagttaccaataataataataacatacct
actgtacctgttaataatatatcaccacctacttcaaccatttcgagtccaaataatcaa
cacctattaccaactccaccaaatatcaataatacatcaatatccacaacaaatgtacct
aatatttctaccaccacatcaaatgaatcgattatatcacaaccaatatcaccaactcat
aagaatatagcgggagttgtaagaccattcagaccaaattcgccaccattaactattgat
acattaacatcatcatcatcgtcatcaacaataccaacgacaaccaatggttctttatca
actcatgatacaccaaatacatcaccaactttatcatctataaattataataataataat
aataataataataataataataataataataataataataataataataataataataat
aataatagaaagaattcaataataacaactacaacaccaaataatgaaactaataatatt
attaaatttgtacataaagaaattagaaggccaacaaaagataatcatgatattatcatt
caacaactttcaaaactattttcaattttaagtgatggtaatcttcgattaaaactatta
aaagatactatcaatttagcaaaagaatataaaaaatcttctttaatttcaaaattaatt
ggttatattgatcaaataaaataa
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