Pseudodesulfovibrio mercurii: DND132_0518
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Entry
DND132_0518 CDS
T01709
Name
(GenBank) peptidase dimerization domain protein
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ddn
Pseudodesulfovibrio mercurii
Pathway
ddn00300
Lysine biosynthesis
ddn01100
Metabolic pathways
ddn01120
Microbial metabolism in diverse environments
ddn01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ddn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DND132_0518
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ddn01002
]
DND132_0518
Enzymes [BR:
ddn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
DND132_0518
Peptidases and inhibitors [BR:
ddn01002
]
Metallo peptidases
Family M20
DND132_0518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
EGB13735
UniProt:
F0JFQ7
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All DBs
Position
566842..568065
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AA seq
407 aa
AA seq
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MDALFSELDRQTEAVVELQTRLTAIPALGPRNGGEGEKAKADFLLGHLQSMGIRDIREFN
APDPDVPCGYRPNIVAVVPGRNTEKTLWVISHIDVVPPGDLGLWNSDPYVVQRDGDTLVG
RGVEDNQQGMVSSLLTAKGLLDLKITPEMNYGLILVSDEETGSGFGLDYIVREHEDLFGK
DDLFLVPDSGEPSSEMVEVAEKSMFWVKITVIGKQCHASTPDQGVNSMFPSAEFILRIKE
LETLYPAEDALFSPPRSTFQPTMREANVANVNTMPGRDVFYVDCRVMPQYDLNDVLGTIR
AIGAEVAAKYGVTVECEPIMWEQAAPATPADSEIAVRTMASVRRIYHNNPHTVGVGGGTV
AAFLRRKGYDAVVWSTLNHNAHQPNEWSSIKSTIGDAKVIADMLLTR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgctcttttccgaactggaccgccagaccgaggcggtcgtcgaactgcagacc
agactgacggccattccggccctcggaccccgcaacgggggcgaaggcgaaaaggccaag
gccgacttcctgctcggccatctccaatccatgggtatccgggacatccgcgagttcaac
gccccggacccggacgtgccctgcggctaccgccccaacatcgtggcggtcgtccccggc
aggaacacggaaaagaccctgtgggtcatatcgcacatcgacgtggtccctccgggagac
ctcgggctgtggaattccgatccctacgtggttcagcgcgacggcgacaccctggtcggc
cggggcgtggaggacaaccagcagggcatggtctcctcgctgctgaccgccaaggggctg
ctcgacctgaagatcaccccggagatgaactacggcctgatcctcgtgtccgacgaggag
accggctcgggcttcggcctggactacatcgttcgcgagcacgaggacctcttcggcaag
gacgacctcttcctggtcccggattccggcgaaccctcctccgagatggtcgaggtggcc
gaaaagtccatgttttgggtcaagatcaccgtgatcggcaagcagtgccacgcctccacc
ccggaccagggcgtcaactccatgttccccagcgcggagttcatcctgcgcatcaaggag
ttggagaccctgtacccggccgaggacgccctgttcagcccgccccgctccaccttccaa
ccgaccatgcgcgaggccaacgtggccaacgtgaacaccatgcccggccgggacgtgttc
tacgtggactgccgggtcatgccccagtacgacctgaacgacgtactcggaaccatccgg
gccattggcgccgaggtggcggccaagtacggcgtgaccgtggagtgcgagccgatcatg
tgggagcaggccgcaccggccaccccggcggacagcgagatcgcggtccggaccatggcc
tcggtgcgcaggatctaccacaacaatccgcataccgtgggcgtgggcggcggcaccgtg
gccgcgttcctgcgtcgcaagggctacgacgccgtggtctggtccaccctgaaccacaac
gcgcaccagcccaatgaatggtcttccatcaagagcaccatcggcgacgccaaggtcatc
gccgacatgctcctgacccggtag
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