KEGG   Dickeya dianthicola: DDI_3462
Entry
DDI_3462          CDS       T05141                                 
Name
(GenBank) CRISPR-associated helicase Cas3, Yersinia-type
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
ddq  Dickeya dianthicola
Brite
KEGG Orthology (KO) [BR:ddq00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ddq02048]
    DDI_3462
Enzymes [BR:ddq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DDI_3462
Prokaryotic defense system [BR:ddq02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    DDI_3462
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C DEAD HD Cas3_HD Helicase_C ResIII SelB-wing_1_3
Other DBs
NCBI-ProteinID: ATO34630
LinkDB
Position
complement(3560817..3564095)
AA seq 1092 aa
MNILLISECNKRALVETRRVLDQFAERKGERTWQTAITEEGLKTLRQLLRKTARRNTAVA
CHWIRSANHTELLWIVGNLRRFNLQGSVPTNHTERDILRSHDENPWHSAEAFSLLAAIAG
LFHDIGKANALFQAGLRGEGPRSQPYRHEWVSLRLFQAFVGDRDDAGWLTALAAISPDDE
AALLARLQQDANVPKPSPFKHLSPLAQVVGWLIVSHHRLPMFQRLTEGESGGTPQLEFLD
HWLNEHLSPRWNAVNHLRPDIGAQEWQQVWCFPHGTPLQSRVWCEKARKFAARALKLPSL
MTFGQLDQRLTVHLARLALMLADHHYSSSDATSGWQDPRYTVWANTDRKTGKLKQQLDEH
CVGVAQNALLLGRSLPHLRDTLPAITRHKGFRQRSTDARFRWQDKAFDKVCAIREQAARH
GFFGVNMASTGRGKTLANARIMYALADESIGCRFSVALGLRTLTLQTGDALRQRLTLDED
DLAVLIGSQAVQDLHELRQQEAQAAQTGSESAESLFSEHQYVSYDGSLDDGRLKTWLEKA
PTLHQLLSAPVLVTTIDHLMPATESLRGGHQIAPMLRLLTADLVLDEPDDFGLEDLPALC
RLVNWAGMLGSRVLLSSATLPPALIRALFEAYLNGREAWQQAYGEPGTPLSICCGWFDEF
DSQCQTMADTHAFAEQHQAFVAGRIGKLQQQEQRLRWAEIEPVASPAQEASAVCQAVAQT
LHQRLFALHREHHQTHSGGKTVSLGLIRMANINPLVAVARALMDMPSPPDYCVHYCVYHS
QHPLAMRSHIEARLDAALMRKDPDTLWQVAEMRDAIERQPQRHHLFVVLATSVAEVGRDH
DYDWAIAEPSSMRSVIQLAGRILRHRQRDECVPTSPNFYLLSHNVRALKGETVAFCRPGF
ESKDGLTLASHDLREILKPEDYQTISATPRITEPVMKKPFTLISLEHAALAGKLFGQRND
PPSQPTAVMWWRKPLHWNGELQRHTPFRRSDPQQRYWLRLEDDGDEPRFMMQDDGPSGWK
TSDVIRPVQQEMADGVSQWVATDYTALYLQLAEEKQWELARVSDRFGEISISTRDNQSWC
WHPLLGVFGEKS
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgaacatcctgctgatttctgagtgcaacaagcgggcgctggtggaaacccgccgggtg
ctggatcagttcgccgagcgcaaaggggaacgcacctggcagaccgccatcaccgaagag
gggttgaaaacgctgcgccagttgctgcgcaaaaccgcgcggcgcaacacggcggtggcc
tgccactggattcgcagcgccaatcacaccgaattgttgtggattgtcggtaatctgcgg
cgtttcaacctgcaaggcagcgtacccaccaaccacaccgagcgcgatattctgcgcagc
cacgatgaaaacccgtggcatagcgccgaagccttcagcctgctggcggcgattgccggg
ctgtttcacgacatcggcaaggccaatgcactgtttcaggccgggttgcggggcgagggg
ccgcgcagtcaaccatatcgccacgagtgggtgtcgctgcggttgtttcaggcgtttgtc
ggcgaccgggatgacgccggctggctgacggcgcttgccgccatcagcccggatgatgag
gcggcgttgctggcgcgcttgcagcaggatgcgaacgtacccaaaccgtcgccgtttaag
cacctgtcgccgctggcgcaggtggtgggctggctgattgtttcccaccaccgcttgccg
atgtttcagcgattgacggaaggcgaatcgggcggaacgccgcaactggagttcctcgac
cactggctcaatgaacatctctcgccgcgctggaatgccgtgaatcacctgcgcccggat
atcggcgcgcaggagtggcaacaggtgtggtgttttccgcacggtacgccgctgcaaagc
cgcgtctggtgcgaaaaggcgcgcaagttcgccgcccgcgcgctgaagctgccgtcgctg
atgacctttggccaactggatcaacggctgacggtgcatctggcgcggctggcgctgatg
ctggcggaccaccactactcctcttccgatgccacctccggctggcaagacccgcgctat
accgtgtgggccaataccgatagaaagaccggcaagctcaaacagcaactggatgagcac
tgcgtcggcgtggcgcagaatgcgctgttgctcgggcgcagcctgccgcacctgcgcgac
acgctgccggccatcacccggcacaaaggctttcgccagcgcagcaccgatgcgcgtttc
cgctggcaggacaaggcgtttgacaaggtctgcgcgatacgtgagcaggccgctcgccac
ggtttctttggcgtcaatatggcgtctaccgggcgcggcaagacgttggcgaatgcccgc
attatgtacgcgctggcagacgaatccatcgggtgccgcttttcggtggcgctcggcctg
cgcaccctgacgctgcaaaccggcgacgcgctgcgccagcggctgacgctggatgaagac
gacctggcggtgttgattggctcgcaagcggtgcaggacttgcatgaactgcgccagcag
gaagcacaggccgcgcaaaccggcagcgaatcggccgagtcgctgtttagcgagcatcag
tacgtcagttacgacggctcgctggatgacgggcggctgaaaacctggctggaaaaagcg
ccgacgctgcatcaactgctgagtgcgccggtgctggtcaccaccatcgaccacctgatg
ccggccaccgaaagcctgcgcggcggccaccagattgcgccgatgctgcggctactcacc
gcggatttggtgctggacgagccggacgattttgggctggaagacttgcccgcgttgtgt
cggctggtgaactgggcggggatgctcggctcacgggtgctgctgtcatccgccacgttg
ccgccggcgttgatccgcgcgctgttcgaagcctacctgaacggccgcgaagcctggcag
caggcttacggcgagccgggcacgccgctgagtatttgctgcggctggtttgatgaattc
gacagccagtgccagacgatggcggatacccacgcttttgccgaacagcatcaggcgttt
gtcgccgggcgcatcggcaaactgcaacagcaggaacagcggctgcgctgggcggagatt
gagccggtggcaagcccggcgcaagaggcgagcgcagtgtgccaggcggtggcgcaaacc
ctgcaccagcggttgtttgcgctgcaccgggaacatcaccagacgcattccggcggcaaa
accgtgtcgctggggttgattcgcatggcgaacatcaacccgctggtggcggtggcgcgt
gcgctgatggatatgccttccccgccggattactgcgtgcattattgcgtctatcacagc
caacacccgctggcgatgcgctcccacattgaagcgcggctggatgcggccctgatgcgt
aaagacccggacacgctgtggcaggtggcggaaatgcgtgacgccatcgaacgccagcca
cagcggcatcacctgtttgtggtgctggccacctcggtggcggaagtgggccgtgaccat
gattatgactgggccatcgccgaacccagctcgatgcgctctgttattcagttggccggg
cgcattctgcgccaccgccagcgtgacgagtgtgtgccgacctcacctaacttttatctg
ctaagccataacgtgcgggcgctgaaaggggaaacggtggcgttttgtcgccccggtttt
gagtcgaaagacggcttaacgcttgccagccacgacctgcgggagatcctcaaaccggag
gattatcagaccatcagcgccacgccgcgtattaccgagccggtaatgaaaaaacccttc
acgttgatttcgctggaacacgccgcgctggcgggaaaattgttcgggcagagaaacgac
ccgccttcgcagccaacggcggtgatgtggtggcgcaaaccgctgcactggaacggcgaa
ctgcaacggcacacgccgtttcgccgctcagacccacaacagcgttactggctgcggctg
gaagacgacggcgatgaaccgcgctttatgatgcaggacgacgggccgagcggctggaaa
accagcgatgttatccgcccggtgcagcaggagatggccgatggcgtcagccagtgggtg
gcgacggattacaccgcgctttacctgcaactggctgaggaaaaacagtgggagttagcc
cgggtcagcgaccgttttggtgaaatcagtatcagcacacgagataaccagtcgtggtgc
tggcacccgctgttaggggtgtttggggaaaaatcatga

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