Candidatus Doolittlea endobia: MHIR_DE00463
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Entry
MHIR_DE00463 CDS
T04480
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
den
Candidatus Doolittlea endobia
Pathway
den03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
den00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MHIR_DE00463 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
den03400
]
MHIR_DE00463 (recC)
Enzymes [BR:
den01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MHIR_DE00463 (recC)
DNA repair and recombination proteins [BR:
den03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MHIR_DE00463 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CUX96725
UniProt:
A0A143WSJ7
LinkDB
All DBs
Position
I:551007..554399
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AA seq
1130 aa
AA seq
DB search
MFTIYHSNQLDLLKTLAAKLIAGRPLRDPFQPEIILVQSHSMAQWMKMELAAQLGIAANI
DFLLPDSFIWKMFACVLPDIPDKNAFAKPIMTWRLMALLTRLCQHPDCALVNDYLRDDED
KRKSFQFAAQIADLFEQYLVYRPDWLESWQHGELIDGMGETQRWQALLWQTLVAGEPLWQ
NRANLHQYFVKTLTKSHTRPLGLPDRIFIFGISSLPPTYLQVLQALGRHIDIHFLFTNPC
RYYWGDIHDHTFLARLMRRRRQHYQQKTEQALFRQPEQADALFNELGEQQTGNPLLASWG
KQGRDSLYLLAQVDDIAEVDAFVEPVTVNLLSLLQRDILMLEDHAVISMSSEIHKHGDSK
RLLQLDDRSLTLHICHSPQREVEVLHDSLLAMIAEDPTLRPRDIIVMMPDIDFYTPAIQA
VFGNTSGNRYLPFAISDRRARYFHPLLPAFLSLLDLPRSRFSAEQVLALLEIPAIAARFS
INEQGLQMFRQWVAESNFRWKLGDDTLHELILSTTGKQTWQFGLTRMLLSYAMDSHSGDW
HGSVPYNESSGLKAMLVRQLTTFLMRLCQWRNRLIHPRSLDAWLSCAREISEDFFTPDAE
AESALTLLKNQWKQLLEDGLQAGYDQLVPVTLLQSELAERLEKKHINQSSLDGTINFCAL
MPMSSVPSRVVCLLGMNDGVYPRTLPPTKFDLMVQQPRRGDRSRRDDDRYLFLETLMSTQ
QRLYISFIGRAIQDNTLRYPSVLVSELSDYIAQSFYLPGDEHANTASSADRVRAHLWNWH
SRMPFDPENFLPDNENQSFADEWLPAACSSGKPQPDFVAPLTTLPRKALSLNELLHFYRH
PVRAWFVQRLMISFHQTSLELAANEPFVINSLTRYQLNCKLVNTLIDGESTDHLFRQVCD
AGLLPYGTFGELYWAKQCQDMTRLAEQVQTWQLPKTYSLKVELSLEGVTLSGWLPQVQQN
GLLRWRPGTLSVRDGLLLWLEHLAYCAMGGEGESRMFGIHSEWHFAPLSSAQAKSFLLSL
ISGYCQGMTTPLLLLPHSGGAWLSHCYDRTTQRIDRDENRQRQAHDKLIQAWQGNTYVPG
EGTDPYLQRLIRQLNQQYLEKILSTTERYFLPFFRLNLAQTKPAGKRNKA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccatttatcattcgaatcagctggatctgctgaaaacacttgctgctaaactg
atcgcagggcggccgctgcgcgatccgttccagccagaaatcattcttgtgcaaagccat
agtatggcgcaatggatgaagatggaattagcggcacaattaggcattgcggctaatatc
gactttttactgcccgacagctttatctggaagatgtttgcttgcgttttgccagatatt
cccgataaaaatgcgtttgcaaaaccgataatgacctggcgattgatggcactgttaacg
cgactatgtcaacaccctgattgcgcgctggtaaacgactatctgcgcgacgatgaagac
aagcgtaaaagttttcagttcgcagcccaaatagccgatctgtttgaacaatatctggta
taccgacctgactggcttgaaagttggcaacacggtgaattgattgacggaatgggcgag
acacaacgatggcaggctctgctttggcagacactggtagcaggggagccgctgtggcaa
aatcgcgctaatcttcaccagtattttgtcaaaactttgacgaaaagtcatacgcgtcca
ctaggactgccagataggatatttatcttcggcatttcgtcgctaccgcctacttatttg
caagtgcttcaagcactaggccgtcatattgatattcacttcttattcacgaatccgtgt
cgctattactggggagacatccacgatcacacttttctcgcgcgcttgatgcgtcgccgc
cgacagcactatcagcagaaaactgagcaggcgctgttccgacagcctgagcaagctgat
gcgcttttcaatgagctgggagagcagcaaacaggtaatcctctgcttgcctcctggggc
aagcaagggcgagatagcctttacctgttagcgcaggtagacgatattgcggaggtagat
gcgttcgttgagccagtgacagttaaccttctgagcttactgcagcgtgatattctaatg
cttgaggaccacgccgtgattagcatgagctctgagatacacaagcacggcgacagcaag
cgtttgctacagctagatgatcgatcattaaccctacatatctgtcatagcccgcagcgg
gaagttgaagtgctacacgatagtttactggctatgattgctgaggatcctacattgcgg
ccgcgagatatcatcgttatgatgcccgacatcgacttctatactccggcaattcaggca
gtgttcggtaacacctctggaaatcgctatttgccttttgctatttctgaccgtcgagca
cggtatttccatccacttcttccggcgtttcttagtttgctagacttaccacgtagtaga
ttttccgctgaacaagttctagcactgctagaaataccagcgatagcggctcgcttttca
attaacgaacagggactacaaatgttccgccagtgggtagcggaatctaatttccgttgg
aaattgggcgatgataccttacatgaattaatactgtctactaccggaaagcaaacttgg
caatttgggcttacgcgcatgttactaagctacgctatggacagccacagcggtgactgg
catggcagtgtgccctataacgaatccagcggtctgaaagccatgctggtcaggcagtta
actacatttctaatgcggctgtgtcagtggcgtaaccggcttatccacccccgctccctg
gatgcctggttaagttgtgctcgtgaaataagtgaggatttctttacgccagacgccgaa
gcagaatcggcgctgacgctgttgaaaaatcagtggaaacaattgttagaggacgggtta
caagcgggatatgaccaactagtgccggtgacacttttgcaaagtgaactggctgagcgt
ctagaaaagaagcatattaaccagagttccctagacgggacgatcaatttttgtgcgctg
atgccaatgagctctgttccgtcccgagtagtatgcctgttgggcatgaatgacggtgtt
tatccgcgcacactgccaccaacgaaatttgacctgatggtgcagcagccacgacgtgga
gatcgcagccgacgtgatgatgaccgatacctgttcttggaaacgttgatgtccacgcag
caacggctatatatcagttttataggtcgcgccattcaagataatacattacgctatccg
tcggtactggtgagcgagctgagcgattatatcgcccaaagtttttacctgcctggcgat
gagcacgctaatactgcaagtagtgccgatcgggtgcgcgcacatctctggaactggcat
agccgcatgccttttgatccggaaaattttctgccagataacgaaaatcaaagctttgct
gacgaatggctaccggctgcctgttccagcggcaaacctcagccagattttgttgctccc
ttgacgactctgcctcgtaaagcgctgtcgttgaatgaactgctgcatttttatcgccac
ccggttcgtgcctggtttgtgcaacgtttaatgatatctttccaccaaacgtcgcttgag
ctagctgcgaacgaaccatttgttattaatagcttaactcgttaccagcttaattgtaaa
ttagtaaatacgctcatcgacggggaaagcacggatcatctgtttagacaagtatgtgat
gccggcctgttgccttatggcaccttcggtgagctgtattgggccaaacaatgccaggat
atgacgagactggctgaacaggtacagacgtggcaattgccaaaaacatatagtcttaag
gtcgagctaagtttagagggcgtgacactttccggttggttgcctcaggtgcagcagaac
ggtctgctacgctggcgtcccggcacgttatcagtccgagacggcctgttattatggtta
gaacacctggcgtactgtgctatgggcggtgaaggtgaaagccgaatgttcggtattcac
agcgagtggcattttgctccactgtcttccgcgcaggcaaaatcgtttttactttcacta
atttcaggctactgtcaggggatgacaactcctcttcttctattaccgcattcaggggga
gcatggttaagccactgttacgaccgaacgacgcagcgtatcgatcgagacgagaatcgg
caacggcaggcgcatgataagcttatacaggcctggcaagggaatacatatgttccagga
gagggaacagatccttatcttcaacgattaatacgccagttaaatcaacaatatcttgag
aagatcctctcgaccaccgaacggtattttttaccgttctttagattgaatttagcgcaa
actaagcctgcggggaagagaaataaagcctga
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