Devosia sp. H5989: XM25_03980
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Entry
XM25_03980 CDS
T04003
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
deq
Devosia sp. H5989
Pathway
deq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
deq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
XM25_03980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
deq02000
]
XM25_03980
Transporters [BR:
deq02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
XM25_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
AAA_29
nSTAND1
AAA_16
AAA_25
DUF87
nSTAND3
RsgA_GTPase
FtsK_SpoIIIE
NACHT
AAA_24
Sigma54_activat
Hpr_kinase_C
SbcC_Walker_B
AAA_23
ATP-synt_ab
DUF3987
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AKR54979
LinkDB
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Position
827370..829130
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AA seq
586 aa
AA seq
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MTPLLSVKDLRVGFGRDPKANEVVHGVSFEISAGETVAIVGESGSGKSVTALSVNRLVDF
GGGRVTAGSIAFQRDDGSVLDLVAADESRLETIRGREIGMIFQEPMTSLNPVHTIGWQIE
EAFRLHKGLRGRAATTAAREALERVRIPDAARRLSYYPHQLSGGMRQRVMIAMALASSPR
LLIADEPTTALDVTVQAQIMALLDELRREMGMGMIFITHDIGLVAGIADKVMVMQGGIAV
EQGELGAILDNPQHPYTQHLLTAVPHFSNGTAVRTDRVEADVKDAPIVTVADLAVRFPVR
SGVFRRQTGAVHAVDGVNFELRRGQTLAIVGESGSGKSTTARALMGLVRPTRGVIETSET
RPGRHSSERPLQMVFQDPFASLNPRLTVRGLLAEPAIAAGIPNDAELVRKMEALLERVGL
KPDSLERYPHEFSGGQRQRLCIARALMLNPDVVVLDEAVSALDVSVQARVLELLVDLQHE
YGLAYLFISHDMAVVERIAHRVAVMFAGQIVEIGEASSVLSNPQHSYTKRLISAVPSVDR
RHQRFELDTRQVPSLVRPAGFEPEPAQWREVGADHRARVEMTGSDS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgttgctttccgtcaaggacctgcgggtcggcttcggacgtgatccgaaggcc
aatgaggtggttcacggcgtctcgttcgagatatcggcgggcgaaacggtggcgatcgtc
ggcgagagcggctcgggcaaatccgtgacggcgctctcggtcaatcgcctcgtggatttc
ggcggcggacgcgtgacggccggctcgatcgctttccagcgggacgatggcagtgtgctg
gacctcgtcgcggctgacgagagccgcctcgaaaccatcaggggacgggagatcggcatg
atcttccaggagccgatgacctcgctcaatccggtgcataccatcggctggcagatcgag
gaggcattcaggctgcataaggggctgcgtggacgtgcggcgaccaccgcagcgcgcgaa
gcgctggagcgtgtccgcattcccgatgccgcccggcgtctctcctactatccccaccaa
ctgtccggtggcatgcgtcagagggtgatgatcgccatggcgctggccagcagtccgcgc
ctgctcatcgccgatgagcccacgaccgcgctggacgtcaccgtccaggcgcagatcatg
gcgctgctcgatgagctgcggcgcgagatgggcatgggcatgatcttcatcacacacgac
atcggcctcgttgccggcatcgccgacaaggtgatggtcatgcaggggggtattgccgtc
gagcagggggagctgggcgccatcctcgacaatccacagcacccctatacgcagcacctg
ctgaccgcagtgccccatttcagcaacggcaccgccgtcaggacggaccgggtcgaggcg
gacgtgaaggacgccccgatcgttacggtggccgacctggccgtgcgttttccggtgcgt
tcgggggttttccgccgccagacgggagccgtccacgcggtagacggggtcaattttgag
ctccgccgcgggcagaccctcgccatcgtgggtgaaagtggatcgggcaagtcgacgacg
gcccgcgccctgatgggcctcgttcgacctaccaggggcgtgatcgagaccagcgagacc
cggccgggccgacactcctcggaacggcctctccagatggtgttccaggaccccttcgcc
tcgctcaatccgcgcctgaccgtcaggggccttctggcggagccggcgattgccgccggc
atccccaatgacgccgagctcgtgcgcaagatggaggccctgctcgaacgggtcgggctg
aagcccgacagcctcgagcgctacccgcacgagttctccggcggacagcgccagcgcctg
tgcattgcccgggccctgatgctcaacccggacgtcgtcgttctcgatgaggccgtctcg
gcgctcgacgtttccgtgcaggcgcgcgtgctcgagctgctcgtggacctgcagcacgaa
tatggcctggcctacctcttcatctcccacgacatggcggtggtcgagcggatcgcgcac
cgcgtcgcggtgatgttcgccggccagatcgtggagatcggcgaagcgtcctccgtgctt
tccaacccacagcattcctataccaagcgcctgatctcggcggtgccgtccgtcgatcgc
cgtcaccagcggttcgagctcgacacgcgccaggtgccctcgcttgtgcggccggccggg
ttcgagccggagcccgcgcagtggcgcgaagtgggcgccgaccatcgtgcgcgcgttgaa
atgacaggtagtgactcatga
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