KEGG   Devosia sp. H5989: XM25_08305
Entry
XM25_08305        CDS       T04003                                 
Name
(GenBank) Ribonucleotide reductase of class Ib (aerobic), alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
deq  Devosia sp. H5989
Pathway
deq00230  Purine metabolism
deq00240  Pyrimidine metabolism
deq01100  Metabolic pathways
deq01232  Nucleotide metabolism
Module
deq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
deq_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:deq00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    XM25_08305
   00240 Pyrimidine metabolism
    XM25_08305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:deq03400]
    XM25_08305
Enzymes [BR:deq01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     XM25_08305
DNA repair and recombination proteins [BR:deq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    XM25_08305
SSDB
Motif
Pfam: Ribonuc_red_lgC RNR_N Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AKR55800
LinkDB
Position
1730598..1732751
AA seq 717 aa
MDTLTLERPAKAPDQTLDFHALNAMLNLYDSEGRIQFDKDRLAARQYFLQHVNQNTVFFH
NLREKLDYLVTEGYYEQEVLDQYAFNFVRDLVDHAYGKKFRFPTFLGAFKYYTSYTLKTF
DGKRYLERYEDRVCMVALTLARGDEQLARNLVDEIISGRFQPATPTFLNAGKKQRGELVS
CFLLRVEDNMESIGRAINSALQLSKRGGGVALSLTNIREMGAPIKQIENQSSGVLPVMKL
LEDSFSYANQLGARQGAGAVYLHAHHPDIMRFLDTKRENADEKIRIKTLSLGVVIPDITF
ELARNNEDMYLFSPYDVERVYGVPFTEISVSEKYREMVADSRIRKKKIKAREFFQVIAEI
QFESGYPYIMFEDTVNRANPIAGRVTMSNLCSEILQVSEPSVFNDDLSYSHMGKDISCNL
GSLNIAAAMDSVDFGRTIETSIRALTAVSEMSDIASVPSVAKGNADSHAIGLGQMNLHGY
LARERIFYGSEEGVDFTNIYFYTVAYHAVRTSNLIAAERGRSFKGFENSKYASGAYFDKY
TEQEWKPATEKVETLFEKAGIHIPTQEDWRELKARVMETGLYNQNLQAVPPTGSISYINH
STSSIHPIVSKIEIRKEGKIGRVYYPASFMTNDNLEYYQDAYEIGPEKIIDTYAAATQHV
DQGLSLTLFFRDTATTRDINRAQIYAWKKGIKTIYYIRLRQMALEGTEVQGCVSCTL
NT seq 2154 nt   +upstreamnt  +downstreamnt
ttggacacgctcacactagaacgccccgcaaaggccccggaccagacgctggatttccac
gcgctcaacgcgatgctgaacctctatgacagcgagggccgcatccagttcgacaaggac
cgcctggcggcgcggcagtatttcctgcagcacgtgaaccagaacacggtcttctttcac
aacctgcgcgagaagctcgattacctcgtgaccgagggctattacgagcaggaagtgctc
gaccagtacgcgttcaacttcgtccgcgacctggtcgaccacgcctatgggaagaagttc
cgctttcccacgttcctgggcgcgttcaagtactatacgagctatacgctcaagaccttc
gacggcaagcgctacctcgagcgctacgaggaccgggtctgcatggtcgccctgacgctg
gcgcgcggcgacgaacagctcgcacgcaacctcgtggacgagatcatttccgggcgcttc
cagccggccaccccgaccttcctcaatgccggcaagaaacagcgcggcgaactcgtctcg
tgcttcctgctgcgcgtggaggacaacatggagagcatcggacgcgccatcaattcggcg
ctccagctctccaagcgcggcggcggcgtggctctcagcctcaccaacatccgcgagatg
ggcgcacccatcaagcagatcgagaaccagtcctcgggcgtgctgccggtgatgaagctc
ctggaggattcgttctcctatgccaaccagctgggggcgcggcagggcgcgggagcggtt
tacctgcacgcccaccaccccgacatcatgcgcttcctcgacaccaagcgcgaaaatgcc
gacgagaagatccgcatcaagacgctgtcgctgggcgtggtgatccccgacatcacgttc
gaactggccaggaacaacgaggacatgtacctgttctcgccctacgacgtggagcgggtc
tacggcgtgcccttcaccgaaatctcggtgagcgaaaagtaccgcgagatggtggccgac
agccgcatccgcaagaagaagatcaaggcgcgcgaattcttccaggtcatcgccgagatc
cagttcgagagcggctatccctacatcatgttcgaggacacggtgaaccgggccaacccg
attgccggccgcgtgaccatgagcaatctctgctcggaaatcctgcaggtcagcgagccc
agcgttttcaacgacgacctttcctatagccacatgggcaaggatatctcgtgcaacctg
ggttcgctcaacatcgccgcggcgatggattcggtcgatttcggcagaaccatcgagacc
tcgatccgcgcgctgaccgccgtgtcggagatgagcgacatcgcctccgtcccctcggtg
gccaagggcaatgccgatagccacgccatcggactcgggcagatgaatctgcacggctac
ctggcccgcgagcgcatcttctacgggtccgaggaaggcgtcgacttcactaatatctat
ttctacaccgtggcttaccacgccgtccgcacctcgaacctcatcgccgccgagcgcggc
cggagcttcaagggcttcgagaactcgaaatatgcgagcggcgcctatttcgacaaatac
accgagcaggaatggaagcccgccaccgaaaaggtcgagacgctgttcgagaaggccggc
atccacattccgacccaggaggactggcgcgaactcaaggccagggtgatggagaccggc
ctctacaaccagaacctccaggccgtgccgccgaccggctcgatctcctacatcaaccac
tcgacctcctcgatccacccgatcgtctccaagatcgagatccgcaaggaaggcaagatc
ggccgcgtctactatcccgcgtccttcatgaccaacgacaacctggaatactaccaggat
gcctatgagatcgggcccgagaagatcatcgacacctatgcggcggccacccagcatgtc
gaccagggcctgtctctgacgctgttcttccgcgacaccgccacgacccgcgatatcaac
cgcgcccagatctacgcgtggaagaagggcatcaagaccatctactacatccgactgcgc
cagatggcgctcgagggcacggaggtgcagggctgcgtttcctgcacgctctga

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