Drosophila erecta: 6555035
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Entry
6555035 CDS
T01060
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
der
Drosophila erecta
Pathway
der03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
der00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
6555035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
der03019
]
6555035
Messenger RNA biogenesis [BR:
der03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
6555035
U7-dependent histone pre-mRNA processing factors
6555035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
6555035
NCBI-ProteinID:
XP_001981406
FlyBase:
FBgn0103930
UniProt:
B3P5M6
LinkDB
All DBs
Position
Unknown
AA seq
756 aa
AA seq
DB search
MTSIIKLHTISGAMDESPPCYILQIDDVRILLDCGWDEKFDANFIKELKRQVHTLDAVLL
SHPDAYHLGALPYLVGKLGLNCPIYATIPVFKMGQMFMYDLYMSHFNMGDFDLFSLDDVD
TAFEKITQLKYNQTVSLKGKGYGISITPLNAGHMIGGTIWKIVKVGEEDIVYATDFNHKK
ERHLSGCELDRLQRPSLLITDAYNAQYQQARRRARDEKLMTNILQTVRNNGNVLIAVDTA
GRVLELAHMLDQLWKNKESGLMAYSLALLNNVSYNVIEFAKSQIEWMSDKLTKAFEGARN
NPFQFKHIQLCHSLADVYKLPAGPKVVLASTPDLESGFTRDLFVQWASNANNSIILTTRT
SPGTLAMELVENCAPGKQIELDVRRRVELEGAELEEYLRTQGEKLNPLIVKPDVEDESSS
ESEDDIEMSVITGKHDIVVRPEGRHHSGFFKSNKRHHVMFPYHEEKVKCDEYGEIINLDD
YRIADATGYDFVPMEEQNKENVKKEEPGMGADQQANGGIGDNDVQLLEKPTKLINQRKTI
EVNAQVQRIDFEGRSDGESMLKILSQLRPRRVIVIHGTAEGTQVVARHCEQNVGARVFTP
QKGEIIDVTTEIHIYQVRLTEGLVSQLQFQKGKDAEVAWVDGRLGMRVKAIEAPMDVTVE
QDASVQEGKTLTLETLDDDEIPIHNSVLINELKLSDFKQILMRNNINSEFSGGVLWCSNG
TLALRRVDAGKVAMEGCLSEEYYKIRELLYEQYAIV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccattatcaagctgcacactatatctggggcgatggacgagtccccgccatgc
tatatcctccagatagacgatgtgcgaatcttactcgactgcggatgggacgaaaagttc
gatgccaacttcatcaaggaactgaaaaggcaggtgcacacattggacgccgtgctgctg
tcccatccggatgcatatcatcttggcgccctgccatacttggtgggcaagctggggctc
aattgccccatctacgccaccattcctgtgttcaaaatgggccaaatgtttatgtatgac
ctttacatgtcgcactttaacatgggcgacttcgatctcttttcgctggacgacgtggac
accgctttcgaaaagatcacccagttgaaatacaaccaaacggtttcactgaagggtaag
ggatatggaatatccattacgcctttaaacgcagggcacatgatcggcggcaccatctgg
aagatcgtcaaggtgggcgaggaagatattgtgtacgcaaccgacttcaatcacaagaag
gagcgccacttgagcggctgcgagctggacaggcttcaaagaccttctctgctcattacc
gacgcctacaacgcccagtaccagcaggccagaaggagggctcgcgatgaaaagctcatg
accaacatcctgcagacggtgcgtaacaacggcaatgtactaatagccgtggacacggca
ggacgagtgctggagttggcacacatgctggaccagctgtggaagaacaaggaatcgggt
ctgatggcctactcgctggcccttcttaacaatgtgagctataacgtgattgagttcgcc
aagtcgcagatcgaatggatgagtgataaactcacgaaggctttcgaaggtgcccgcaac
aatcccttccagttcaagcacattcagctgtgccactcgctggcggacgtctataaattg
cccgctggtccaaaagtggtgttggccagtactccagatctggagagcggattcacgagg
gacctcttcgtgcaatgggccagcaatgccaacaatagcataatcctcactacgcgcacg
tcgcccggcactttagccatggaactggtggagaactgcgcaccgggcaagcaaatcgaa
ttggacgtcaggcgaagagttgaactagaaggagctgagctggaggaataccttcgcaca
cagggcgagaaacttaatcccctcatcgtaaagcccgatgtagaggatgagagcagttcc
gagtccgaggacgacattgagatgagcgtcatcacgggcaagcatgatattgtggtcaga
ccggagggtcgccatcactccggtttttttaagtccaacaaacgacaccacgtgatgttc
ccctatcacgaggagaaggtgaagtgcgatgagtatggggagatcattaatctggacgac
taccgcattgcggatgcgacgggctatgactttgtacccatggaggagcaaaacaaggag
aatgtaaagaaggaagaaccgggcatgggagcagatcaacaggctaacggaggaattggc
gacaatgatgttcagttgctggagaagcccactaagctgataaaccaacgcaaaacaatc
gaagttaatgcccaagtccagaggatcgatttcgaaggtcgctctgatggcgagtccatg
ctgaaaattctctctcagttgagaccacgaagggttattgttatacacggtactgccgaa
ggcacacaagtggtggccagacactgcgagcagaatgtcggtgctcgcgtttttacgccc
cagaagggcgaaatcattgatgtcaccactgagatccacatctaccaagtacgcctgacg
gaaggtcttgtctcccagctacagttccaaaagggcaaggacgcggaggtggcgtgggtg
gatggtcgcctgggcatgcgtgtcaaggccatcgaagcacccatggacgttactgtggag
caggacgcgtccgtgcaggaaggcaagacattgactctggaaacattggatgacgatgag
atccctattcataactcagtgctcattaacgagctgaaactgtccgactttaagcagatt
ctcatgcgcaataacatcaattcggagttctccggcggcgtactctggtgcagcaacgga
actctggcattgaggcgagtcgatgccggtaaagtggccatggagggatgcttatccgag
gagtactacaagatcagggagttgctgtacgagcagtatgcgatcgtttaa
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integrated database retrieval system
