Dehalococcoides mccartyi 195: DET0535
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Entry
DET0535 CDS
T00223
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
det
Dehalococcoides mccartyi 195
Pathway
det03030
DNA replication
det03430
Mismatch repair
det03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
det00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DET0535 (holB)
03430 Mismatch repair
DET0535 (holB)
03440 Homologous recombination
DET0535 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
det03032
]
DET0535 (holB)
03400 DNA repair and recombination proteins [BR:
det03400
]
DET0535 (holB)
Enzymes [BR:
det01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DET0535 (holB)
DNA replication proteins [BR:
det03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DET0535 (holB)
DNA repair and recombination proteins [BR:
det03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DET0535 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AAW40183
UniProt:
Q3Z920
LinkDB
All DBs
Position
488923..489942
Genome browser
AA seq
339 aa
AA seq
DB search
MWQIIGQDKAVSFLCNSLNQDKLCHAYVFYGQSGVGKKRMALSFAQALNCQAASPPCQEC
PVCERIMAGNFPDVIHIELLSAEDSSDGKAKAEIGVKQVEDIQHAASLPPFEGKYKVFII
HQAEKLSVESSNRLLKTLEEPGSQNIFILLTADKSLLLPTVLSRCQILELKYAETGLIHE
AFIKQGLDEEKAELLSHLSYGRVGWAMEAASNPEILEERKAKIDKIMRVLGQDEEDRFNY
AADVSNLFGKNRAEAEEVLDMWLGLFRDMLLLKADAGQNMTNIDYKDILYQACGGLGLVD
IRAGIDNILKAQSQLRANANPRLCLEVLMLSLPLVKEGL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtggcagataataggtcaggacaaggcagtctccttcctctgtaacagcctcaatcag
gacaagctttgccacgcctatgtgttttacggccagtccggggtgggtaagaaacggatg
gcacttagttttgctcaggcgctaaattgtcaggctgcctcacccccatgtcaggaatgc
ccggtgtgtgagcgcatcatggccggaaactttccggatgttatccatatagagcttctt
tcagccgaagattcctctgacggcaaagctaaggccgaaataggggttaaacaggtagag
gatatccagcacgccgccagtttgcccccgtttgagggcaagtacaaggtttttattatc
catcaggctgaaaagctgtcagtagaatcttcaaaccgccttctgaaaacgctggaagag
ccgggttctcaaaatatctttattttgctgaccgctgataaatcactcctgctgcccacg
gttttatcccgttgccagattttggaattaaaatatgccgaaaccggtcttatccatgag
gcatttattaagcaaggtttggatgaagaaaaagctgaacttttgtctcacctgagttat
ggccgggtgggctgggctatggaagcagcctcaaaccccgaaattttggaagaacgtaaa
gctaagattgataagattatgcgggtactggggcaggacgaggaagaccgctttaattat
gccgctgatgtttcaaatctgtttggtaaaaaccgggcagaggctgaagaggtactggat
atgtggctggggctttttcgggatatgctgctacttaaggctgatgccggccaaaacatg
actaatattgattataaagatatactatatcaggcctgtggcgggcttgggcttgtggat
atacgtgcgggtatagataatatacttaaggcccaaagtcagctgcgggcaaatgccaac
cccaggctttgtctggaagtgcttatgctcagtttgcccttggtaaaggaaggactataa
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