Desulfuromonas sp. DDH964: DBW_0618
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Entry
DBW_0618 CDS
T04368
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
deu
Desulfuromonas sp. DDH964
Pathway
deu03420
Nucleotide excision repair
deu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
deu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DBW_0618
03430 Mismatch repair
DBW_0618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
deu03400
]
DBW_0618
Enzymes [BR:
deu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DBW_0618
DNA repair and recombination proteins [BR:
deu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DBW_0618
MMR (mismatch excision repair)
Other MMR factors
DBW_0618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AMV71009
UniProt:
A0A143B4N4
LinkDB
All DBs
Position
657558..659756
Genome browser
AA seq
732 aa
AA seq
DB search
MHSLLAALNEPQRQAVQHGDGPLLILAGAGSGKTRTLTHRVAWLIHEAKVAPWQILAVTF
TNKAAAEMKERLERLLGSEELPWVATFHATCVRILRREIELLGFTQAFTIYDDQDQERLL
KSILDEFGIPEKSLRPRAAASFIDGAKNRGLLPGDLPADDLATAQLVKIYARYQQRLQQA
NALDFGDLLLQTVRLFREQPQVLQRWRERFRYLLVDEFQDTNAIQYELVAKLGEVHRNLC
VVGDDDQSIYRWRGAEIGNILGFERDFPGCVTIRLEQNYRSTQTILDAAGEVVAQNRGRK
GKTLWTENPAGEPIGLEALPDDLEEARFVAGEIVRLHGAGRHLRDIAVFYRTNAQSRVLE
EALRSQNLPYVMFGGLKFYARMEVKDVLAYLRLLVNPADSLALRRIINVPPRGIGAVTIG
RIAEYEESAGGLLAACRLALEKGTIGGAAASRVAEFLALLDGFSERLATQPYPQLAADLI
EESGYGPLLREERTEEARGRLENLEALLAGMEEHASSEGTLADYLEQVALITDLDAYDPS
LDRVTLMTLHAAKGLEFPVVFMTGMEEGLFPHSRAAGAGEDLEEERRLCYVGMTRAMEKL
ILSHARRRRVYGTFQYNPPSRFLAEIPPRLLAQTPPGLQRVAGHNLASVFEQLLPDPLPV
TGGDGDDFVEEVRVVPDAEEGLRIGLKVRHVKFGIGTVRRIEGQGDNQKVIVYFNTVGPK
KLLLKFAGLEPA
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtctcctcgccgctctcaacgaaccgcagcgccaggccgtccagcacggtgac
ggaccgctgctgatcctcgccggggccggctccggcaagacccggaccctcactcatcgc
gtcgcctggctgattcacgaggcgaaggttgctccctggcagattctcgccgtgaccttt
accaacaaggccgccgccgagatgaaggagaggctggagcggcttctcggcagcgaggaa
ctcccctgggtggcgaccttccatgccacctgcgtgcgcatcctgcgtcgggagatcgaa
cttcttggcttcacccaggcctttaccatctacgatgaccaggaccaggagcggctcctc
aaatcgattctcgacgagttcggcatcccggagaagagcctgcgcccccgggccgcggcg
agcttcatcgatggcgccaagaatcgtggtctgctccccggcgacctccctgccgacgac
cttgccaccgcccaactggtcaagatctacgcccgctaccagcagcggctgcagcaggcc
aacgccctcgacttcggcgacctgctgttgcagacggtgcggctcttccgcgaacagccg
caggttttgcagcgctggcgcgagcgctttcgctacctgctggtcgatgagttccaggat
accaacgccattcagtacgagctggtggcaaaactcggcgaagtccaccgcaacctctgt
gtcgtcggcgacgatgaccagtcgatctaccgctggcgcggggcggagatcggcaatatc
ctcggtttcgagcgcgattttccgggctgcgtgacgattcgtctggagcagaactaccgc
tcgacccagacgatcctcgatgctgccggcgaggtcgtcgcgcagaatcgtggacgcaag
gggaagaccctgtggactgagaaccccgccggggaaccgatcggcctcgaagcgctcccc
gacgatctcgaagaggcgcgctttgtcgccggcgagatcgtgcgcctccatggcgccggc
cgccatctgcgcgacatcgcggtcttctatcggaccaacgcccagtcgcgcgtcctggag
gaagccctgcgcagccagaacctcccctacgtgatgttcggtggtctcaagttctatgcg
cgcatggaagtcaaggacgtcctggcctacctgcgcctgctggtcaacccggccgattcc
ctcgccctgcggcgcatcatcaacgtgccaccgcgggggatcggcgccgtgaccatcggt
cgcatcgccgaatacgaggagtccgccggcggcctcctcgccgcctgccgcctggcgcta
gaaaaggggacgatcggcggggccgccgccagccgggtcgcagagttccttgcccttctc
gatggttttagcgagcgccttgctacccagccctatccgcaactggcagccgacctgatc
gaggagagcggttacggtcccctcctgcgcgaggagcggaccgaggaagcgcgggggcgg
ctggaaaaccttgaggcgctcctcgccggcatggaagagcacgccagcagcgaggggacc
cttgccgactacctcgaacaggtggcgttgattaccgatcttgacgcctatgacccgagc
ctcgaccgcgtcaccctgatgaccctgcacgccgccaagggtctcgaatttccggtagtc
ttcatgaccggcatggaggagggcctcttcccgcattcccgggccgccggtgccggagaa
gacctggaagaggagaggcgcctctgctatgtcggcatgacccgggcgatggagaagctc
atcctcagtcatgcccggcgccgccgcgtctacggcacctttcagtacaatccgccgagc
cgtttcctggcggaaatcccgccccggcttctggcccagacgccgccaggcctgcagcgt
gtggccggccacaacctcgcttcggtcttcgagcagctgttgcccgacccccttccggtc
accgggggggacggtgatgattttgtcgaagaggtgcgcgtcgttccggatgccgaagag
gggctgcgcatcggcctcaaggtgcgccatgtcaagttcgggatcggcacagtgcgccgt
atcgaggggcagggggataaccagaaggtgatcgtctatttcaacacggtcggcccgaaa
aagctgctgctcaagttcgccggtctcgaaccggcctga
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