Defluviicoccus sp. SSA4: HWD60_03110
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Entry
HWD60_03110 CDS
T06717
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dex
Defluviicoccus sp. SSA4
Pathway
dex03420
Nucleotide excision repair
dex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HWD60_03110
03430 Mismatch repair
HWD60_03110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dex03400
]
HWD60_03110
Enzymes [BR:
dex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWD60_03110
DNA repair and recombination proteins [BR:
dex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWD60_03110
MMR (mismatch excision repair)
Other MMR factors
HWD60_03110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QLH38154
UniProt:
A0A7D5MTB2
LinkDB
All DBs
Position
complement(618950..620713)
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AA seq
587 aa
AA seq
DB search
MVRLLAVSEVMEHLNPAEAASQKALAEVYECLERKESFLVEAGAGAGXTYTLVKALHFLM
DRYQHILQQRHQKIACITFTNVAKDEIDARTDRNPLIYCNTIHAFCWSLISGFQKQLREL
LPQLKHWPDRLAEIGDLGERAVEYELGYRKINDRRVSIDHDDVIALTIDLMDNAKFRCIL
TNKYPIILIDEYQDTNAAWIESIKKHFLGQQVSPQFGFFGDHWQXIYGDGCGKIEHPGLT
VVGKQANFRSVSTIVDCLNRMRPELPQFVVDPNEKGSVRIFHTNSWTGPRQTGSHWGGDL
PSEVADRAFQTALDRIADEGWDLSPESTKILMLTHRVLAGKQGYPSIPKVFSYNESFTNK
EHPHVAYFAESLEPACEAYASRKYGEMFRAFGSKVPAIRAHTDKKKWSEAMDKLIELRGR
GTVGDVIEHLLAVSRPTVPDAVERRERELREFDPEASEDMPRALRELSDLRDVPYQEMIA
LCRYLSGHSPFETKHGVKGAEFKNILVIVGRGWNKYNFNDMLEMAGYEANIPASKKVSFE
RNRNLXYVTCSRPKRCLAVLFTQQLSAAAMQTVINWFGNDTIESLHL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggttgctcgccgtgtctgaggttatggaacacttgaatccggcggaggcagcc
agccaaaaggcacttgcggaggtgtatgagtgtctggagcgcaaggaaagcttcctcgtc
gaagccggcgccggtgccgganaaacctatacgctcgtcaaagcgctgcatttcctcatg
gaccgctatcaacacattctgcaacagcgacatcagaagatcgcgtgcatcacgtttact
aatgtggcgaaggacgaaattgacgcccggaccgaccgaaacccgctcatttattgcaac
acgatccacgcgttctgctggtcgctcattagtgggtttcaaaaacagcttcgggaacta
ctgccgcagctcaagcattggcctgacagactcgccgaaatcggcgacctcggagaacgc
gccgtcgagtacgagttaggctacagaaaaataaacgaccgccgtgtctccatcgatcac
gatgacgttattgccctgaccatcgatctcatggacaacgctaagtttaggtgcatcctg
acgaacaagtacccgattattttgatcgacgagtatcaggatactaacgctgcttggatc
gaatccatcaagaagcactttcttggacagcaggtctccccacaattcgggttcttcggc
gatcactggcaanaaatctacggtgatggatgcggaaaaatcgagcatcccggcctgacg
gtcgttggcaagcaggcgaacttccgatcggtttcgacgatcgtcgattgcttaaaccgc
atgagacccgagttgccccaattcgtcgtcgacccgaatgaaaaaggcagtgtccgtatc
tttcacacgaattcctggacgggcccccgtcagaccggcagtcactggggtggggatctg
ccttccgaggtcgccgaccgtgcttttcagaccgccctcgatcgcattgccgatgagggt
tgggatttatctccagagagtacaaaaattttaatgcttacgcaccgcgtcctagccggc
aagcagggatatcccagcatccccaaggtcttctcttacaacgaatctttcacaaacaag
gagcatccgcacgtcgcgtactttgccgagtctttggagccggcctgtgaggcttatgct
tccagaaagtacggtgagatgttccgtgcgttcggctccaaagtgccagcgatccgcgct
cacacggacaaaaagaagtggtccgaggcgatggacaaactcatcgagttgagaggccgc
ggaacggtcggcgacgtgattgaacatttgcttgcggtaagccggccgacggtccctgat
gctgtcgagcggcgcgaacgcgaactgcgggagttcgacccagaagcgagcgaagatatg
ccacgcgcactgagggaactcagcgatcttcgggacgtcccgtatcaggaaatgatcgct
ctgtgccgctacttgtcaggccactctccattcgagacaaagcatggcgtcaagggagcc
gagttcaaaaacattctcgtcattgtgggtagaggatggaacaagtataatttcaacgat
atgcttgagatggcagggtatgaggcgaatattcccgctagcaagaaagtctcatttgaa
agaaatcgcaatcttntttatgttacatgttcgcggccgaagagatgtttagccgttctc
ttcacccaacagctttccgccgcagccatgcaaacggtcatcaactggttcggtaacgac
acgatagaatctctgcacctatag
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