Defluviicoccus sp. SSA4: HWD60_16445
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Entry
HWD60_16445 CDS
T06717
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
dex
Defluviicoccus sp. SSA4
Brite
KEGG Orthology (KO) [BR:
dex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dex03021
]
HWD60_16445 (rpoH)
Transcription machinery [BR:
dex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWD60_16445 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_11
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QLH40207
UniProt:
A0A7D5MX39
LinkDB
All DBs
Position
3468401..3469285
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AA seq
294 aa
AA seq
DB search
MPGPTFDVGISPDRNLARYLQSIRKFPMLDAAEEAELARRWVEHGDERAAHKLVTSHLRL
VAKIAMGYRGYGLPLGELISEGNVGMMQAVMRFDPSRGFRLATYAMWWIRASIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIEDGDLSPEHVTTIATRLNVPENDVIQMNRRI
GNPDTSLNAPLREEGDGEWQDWLVDQEDSQETQLASFEELDSRRALLTGAMQGLSDRERQ
ILSERRLKDNPTTLESLSQRYGISRERVRQIEVRAFEKLQKSVKNAVIDHRVTH
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaccgacgtttgacgtgggtatatctccggatcggaatctcgcccgctacctg
cagagcatacgcaaatttccgatgctggacgctgcggaagaggccgaactggcgagacgc
tgggtagaacatggggacgaacgggcagcacacaagctcgttacgagccatctgcgcctt
gtcgccaagatcgccatgggataccgcggttatggcctgccgctgggagagctgatctcc
gaagggaatgtcggcatgatgcaggccgtgatgcgcttcgatccgtcgcgcggcttccgg
ctggcgacgtatgcgatgtggtggattcgtgcctcaattcaggaatatattctgcattcc
tggtcgctggtaaaaatgggcacgacggcggcacaaaagaagctgttcttcaacctgcgc
aagctgaagggacagatgcaggccatcgaagacggcgacctgtcgccggagcacgtgacg
acgatcgcaacccgtctgaatgtgccggagaacgatgtcatccagatgaaccggcggatc
ggcaacccggacacctcgctcaacgctccattgcgagaggaaggggatggcgagtggcag
gactggctggtcgaccaggaagacagccaggagacacagctcgccagcttcgaggaactg
gactcgcgacgcgctttgctgacgggtgcaatgcaggggttgagcgaccgcgaacggcag
atcctgtccgagcgccggttgaaggacaatccgacaacgctggaaagcctgagccagcgc
tacggcatctcgcgcgagcgggtccgccagatcgaggtccgcgccttcgagaaactgcag
aagtcggtcaagaacgcggtcatcgaccaccgggtcacccactga
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