Desulfovibrio fairfieldensis: AXF13_05000
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Entry
AXF13_05000 CDS
T04293
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dfi
Desulfovibrio fairfieldensis
Pathway
dfi00300
Lysine biosynthesis
dfi00470
D-Amino acid metabolism
dfi01100
Metabolic pathways
dfi01110
Biosynthesis of secondary metabolites
dfi01120
Microbial metabolism in diverse environments
dfi01230
Biosynthesis of amino acids
Module
dfi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dfi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AXF13_05000
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AXF13_05000
Enzymes [BR:
dfi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AXF13_05000
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AMD89523
UniProt:
A0A109W3Z2
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All DBs
Position
complement(1162371..1163651)
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AA seq
426 aa
AA seq
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MSDIRSAYTDSLHFYGRHTPRELAETYGTPLYVYNENVLRQRCRDLMALSGQPGFGVNYS
IKANANPVLLRMIREEGLVVDAMSPGELFMNDLAGFTPAEILYISNNNSDTELQNALVHG
LLVSVDSLSQLDTLGRLNRGGKVMVRFNPGIGAGHHAKVVTAGKETKFGVTPDKIDEVFA
LLARHELTLAGINQHIGSLFMEPDGYLNAARVLLDLAETLPDGALDRLEIIDFGGGFGIP
YHKYEGEARLDMADLGRRLHAMISGWAASAGYTGRFLVEPGRYVAAECGVLLGRVHAVKN
NGDKRYVGTDLGFNVLVRPAMYDSFHDVEIYRGEKGSADAEPMRQTIVGNICESGDILAK
DRLLPVMREGDVLGILDAGAYGFTMASNYNQRRRPAEVLIQSDGTARLIRRRETLEDLAR
CLDGLL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacatccgctccgcttacaccgacagcctccatttctacggcaggcacactccc
cgcgagttggccgagacctacggcacgccgctctatgtctacaatgaaaatgtcctgcgc
cagcgctgccgcgacctgatggccctttccggccagcccggcttcggggtcaactattcg
atcaaggccaacgccaaccccgtgctgctgcggatgatccgcgaagaaggcctggtggtg
gacgccatgagcccgggcgagctgttcatgaacgatctggccggttttacgcccgccgag
atcctgtacatctccaacaacaattccgacacggaactgcagaacgccctggtgcacggc
ctgctggtcagcgtggactccctttcccagctggataccctgggccgcctcaatcgcggc
ggcaaagtcatggtgcgcttcaaccccggcatcggggccgggcatcacgccaaggtggtc
accgcgggcaaggaaaccaagttcggcgtcacgccggacaaaatagatgaagtcttcgcc
ctgctcgccaggcatgagctgaccctggccggcatcaatcagcatatcggctcgctgttc
atggagcccgacggttatctgaacgcggcccgggtgctgctggatctggccgaaaccctg
cccgacggcgcgctggacaggctggaaatcatcgacttcggcggcggcttcggcattccc
taccacaagtatgagggcgaagcgcgtctggacatggccgatctgggccgtcgcctgcac
gccatgatcagcggctgggccgccagcgccggttacacggggcgctttctggtggagccg
ggccgctatgtggccgccgaatgcggcgtgctgctgggccgggtccatgccgtgaaaaac
aacggcgacaagcgctatgtgggcacggacctgggcttcaacgtgctggtgcgcccagcc
atgtacgattccttccatgatgtggagatctaccgtggcgagaagggctcggcggatgcc
gagcccatgcgccagaccattgtgggcaatatctgcgaaagcggcgatattctcgccaaa
gaccgcctgctgccggtcatgcgcgaaggggacgtgctgggcattcttgatgccggagcc
tacggcttcaccatggcttccaattacaatcagcgccgccgccccgccgaagtgctgatc
cagagtgacggcacggcccgcctgatccgccgccgcgaaaccctggaagatctggcccgt
tgccttgacggcctgctgtag
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