Desulfovibrio ferrophilus: DFE_0786
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Entry
DFE_0786 CDS
T05829
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dfl
Desulfovibrio ferrophilus
Pathway
dfl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DFE_0786
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfl03400
]
DFE_0786
DNA repair and recombination proteins [BR:
dfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DFE_0786
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DFE_0786
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_16
AAA_22
AAA_19
UB2H
AAA_5
AAA_33
DUF87
SRP54
Motif
Other DBs
NCBI-ProteinID:
BBD07512
UniProt:
A0A2Z6AW94
LinkDB
All DBs
Position
842976..844997
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AA seq
673 aa
AA seq
DB search
MPSFDNVTDTIPFRIQSPFEPRGDQPEAIADLVANLSAGVSNQVLLGVTGSGKTFTVAKV
VEALQRPALVLAPNKTLAAQLYNEFRGLFPDNAVEYFVSYYDYYQPEAYLPHTDIYIEKD
SSINDEIEKLRHAATHALLTRRDVLIVASVSCIYGLGSPEYYSKMVVPLEPGQRLSRGQL
IDRLVEVHYERNDYDFHRGTFRVRGDVLEIIPAYSNQQALRVEFFGDEIDAVSETDPITG
EVLNRLPKTIIFPASHYVSDRANLNRSMDEIRDELAIQLGHFRERNMLVEAQRLEQRTQL
DLEMIEELGYCNGIENYSRFLDGRKPGEPPHTLLDYFPEDFMMFLDESHVTVPQVGGMFK
GDHSRKQTLVDFGFRLPSALDNRPLNFEEFKQRIGQAVFVSATPGHWELDQAQGLVVEQI
IRPTWLVDPEIEVRPSAGQMDDLMAECRKRRDAGERVLVTTLTKRMAEDLTEYLQGMGIE
TRYLHSDIDTLERVSILQSLRKGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSV
RSLIQTFGRAARNTHGRVLMYADKVTRSMREAMEETSRRREKQQGYNIEHGMEPTTIRKE
LNNVLDSLYTRSERGRGKTPISAEDMAGDPKAMAAEIKSLEREMRVAAKDLEFERAAQLR
DRITLLRELMRAI
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgccctcattcgataatgttacagacaccattccctttcgtatccagagtccgttcgag
cctcgtggcgatcagcccgaggccattgccgatttggtggccaacctgagcgcaggagtg
tcgaatcaggtcctgctgggtgtgaccgggtcgggcaagacgttcactgtggccaaggtg
gtggaagccttgcagcgacctgcgctggttttggccccaaacaagacccttgcggcccag
ctctataatgaattccgggggctgttcccggacaatgccgttgagtattttgtcagctac
tacgattactaccagcccgaagcctatcttccgcacacggatatctatatcgagaaggac
tcgtccatcaacgacgagattgaaaagctccgccatgctgcaacccatgcactactgacc
cgacgcgatgtgctcatcgtggcctcggtgtcctgcatctatggcctgggttctccagaa
tattactccaagatggtggtgcctcttgagcctgggcaacgtctgtcgcgtgggcagctt
attgatcggttggtggaggtccattacgagcgcaacgattatgacttccaccgtggaacc
tttcgcgtgcgtggcgatgtgcttgagatcattccggcctattccaatcagcaggccttg
cgcgtggagttctttggggatgagattgatgccgtatccgaaaccgaccccatcaccggg
gaggtgctgaaccgtctgcccaagaccattatcttccccgccagccattatgtttcggac
cgagccaatttgaatcgatccatggatgagattcgtgatgagcttgcgattcagttgggg
catttcagggagcgcaacatgcttgtggaggctcagcgcctggagcagcgtacccaactg
gatctggagatgatcgaggaacttggctattgcaacggcatcgaaaactactcccgcttt
cttgatgggcgcaagcccggcgaaccgccgcacaccctgttggactattttcccgaggac
ttcatgatgttcctggacgagtcacacgtgaccgtgcctcaggtcgggggaatgttcaaa
ggcgaccattcgcgcaagcagacgctggtggattttggcttccggctgccttcggcgctg
gataaccggcctttgaattttgaggagttcaagcagcgcatcggacaggcggtgtttgtt
tcagccacgcccgggcattgggaattggatcaggcccagggattggttgtggagcagatc
attcgccccacttggttggtggacccggaaatcgaggtccggccttcggccggccagatg
gatgatctgatggccgagtgccgtaaacgtcgtgatgcgggtgaacgggtgttggtgact
acgttgaccaagcgcatggccgaggacctgacggaatacttacagggcatgggtatcgag
acgcgctatctgcattcggatatcgatacactggagcgtgtgtccattctccaatccctg
aggaagggtgagttcgatgtccttgtagggatcaacctgctgcgggaagggcttgatatc
ccggaagtatccttggttgccattttggatgcagacaaggaaggtttcttgcgctcggtg
cgctcgttgatccagacgttcggacgcgctgcgcgcaacacccatggtcgggtgttgatg
tatgctgacaaggttacgcgctccatgcgggaagccatggaggaaacttcgcgtcgcagg
gaaaaacagcaaggctacaacattgagcacggaatggaaccgaccaccattcggaaagaa
ttgaataatgtactggattcgttatatacacgctcagagagggggaggggcaagacgccg
atttcagccgaagatatggctggagaccccaaggcaatggctgccgagatcaagagtctt
gagcgtgagatgcgtgttgcggccaaggatctggagtttgagcgtgcagcacaacttcgg
gatcggatcacactgctgcgggaactgatgcgagctatttga
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integrated database retrieval system
