Dickeya fangzhongdai DSM 101947: CVE23_04120
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Entry
CVE23_04120 CDS
T05277
Symbol
nifJ
Name
(GenBank) pyruvate:ferredoxin (flavodoxin) oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
dfn
Dickeya fangzhongdai DSM 101947
Pathway
dfn00010
Glycolysis / Gluconeogenesis
dfn00020
Citrate cycle (TCA cycle)
dfn00620
Pyruvate metabolism
dfn00650
Butanoate metabolism
dfn01100
Metabolic pathways
dfn01110
Biosynthesis of secondary metabolites
dfn01120
Microbial metabolism in diverse environments
dfn01200
Carbon metabolism
dfn01210
2-Oxocarboxylic acid metabolism
Module
dfn_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dfn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CVE23_04120 (nifJ)
00020 Citrate cycle (TCA cycle)
CVE23_04120 (nifJ)
00620 Pyruvate metabolism
CVE23_04120 (nifJ)
00650 Butanoate metabolism
CVE23_04120 (nifJ)
Enzymes [BR:
dfn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
CVE23_04120 (nifJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_10
Fer4_7
Fer4_16
Fer4
Fer4_6
Fer4_9
TPP_enzyme_C
Fer4_2
Fer4_21
Fer4_8
Fer4_17
Transketolase_C
Fer4_4
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ATZ93234
UniProt:
A0A2K8QID3
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All DBs
Position
complement(875634..879167)
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AA seq
1177 aa
AA seq
DB search
MITTDGNNAVASVAWRTNEVIAIYPITPSSTMAEQAAAWSSDERKNIWGDTPRVVEMQSE
AGAIATVHGALQTGALSTTFTSSQGLLLMIPTLYKLAGQLTPFVLHVAARTVATHALSIF
CDHSDVMAVRQTGCAMLCASNVQEAQDFALISQMASLNSRLPFIHFFDGFRTSHEINKIE
PLSDAQLRTLLPQAAIDAHRERALTPERPVIRGTASNPDTFFQAREATNPWYNAAFGHVE
QAMNDFARETGRQYRPFEYYGHPDATRVIVMMGSGVGTCEEVIDTLLTRGEKVGVVKVRL
YRPFCAQHLLAAIPQSAQSIAVLDRTKEPGAQAEPLYLDVMTALAEAFSRGERPLMPKVI
GGRYGLSSKEFTPQCVEATYKELALTNPRPRFTVGIYDDITHLSLPLSEQPMPTQASLEA
LFYGLGSDGTVSAAKNSIKIVGNSTPLFVQGYFVYDSKKAGSLTVSHMRVGPHPIHSAYL
IEQADFVACHQWQFIDKYSMVERLKPGGIFLINTPYSADDLWHRLPQEVQAGLNQRQARV
FCINAAKIARECQLGARINTVMQMAFFHLTQILPGGDALDKLRAAIASSYGSKGQELVER
NWRALDATLAALEALALEPVNPDSPCRPPVVSDAAPDFVKTVTAAMLAGLGDSLPVSALP
PDGTWPVGTTQWEKRNIAEEIPLWKPDLCTQCNHCVAACPHSAIRAKVVPADAMADAPAS
LQSLDVKARDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMESRLDHVATE
KTHYDFFLKLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRLL
VANATGCSSIYGGNLPTTPWTTDANGRGPAWANSLFEDNAEFGLGFRLSVDQHRQRALRL
LDQLKPQLPADVVADLLEESVAADTRREQIARLRQSLSAIDSADARQLIEEADHLVDKSI
WLIGGDGWAYDIGYGGLDHVMSLSENVNVLVLDTQCYSNTGGQQSKATPLGAVTKFGENG
KRKARKDLGINVMMYGHVYVAQISLGAQLNQTVKAIQEAEAWPGPSLIIAYSPCEEHGYD
LAFSHDQMRQLTATGFWPLYRFDPRRTAEGKPALVTDSRPPSASLSETLLNEQRFRRLNS
QQPEAAALLYEEAEADLRRRYDFLSLLAGKAEKNAQE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccaccgacggtaataacgcggtcgcttcggtcgcctggcgaaccaatgaagtt
atcgctatctaccccattacccccagctccaccatggccgaacaagcggccgcctggtcg
agcgacgaacgcaagaatatctggggagatacccctcgggtggttgaaatgcaatccgaa
gcgggcgccatcgccaccgtgcacggcgcattgcagaccggcgcgctgtccacgaccttt
acttcctcgcagggcctgctgctgatgatcccgacgctgtacaagttggccggtcagttg
acgccgtttgtactgcacgtcgccgcccgtaccgtggcgacccacgcgttatccattttc
tgcgaccattcggacgtgatggcggtgcgtcagaccggctgcgccatgctgtgcgccagc
aacgtgcaggaagcgcaggacttcgcgctgatttcccagatggcgagcctcaacagccgc
ctgccgtttattcatttctttgacggctttcgcacctcgcacgaaatcaacaagatcgag
ccgctgagcgacgcgcaattgcgcaccctgctgccgcaggcggcgattgatgcacaccgt
gagcgggcgcttactcctgagcgtccggtgattcgcggcaccgcctccaacccggatacc
ttcttccaggcgcgcgaagccaccaacccgtggtacaacgcggcattcggtcatgtggaa
caggcgatgaacgacttcgcccgcgaaaccggccgtcagtaccggccgttcgagtattac
ggccatcccgacgccacccgcgttatcgtgatgatgggctccggcgtcggcacctgcgaa
gaggtgatcgacaccctgctgacgcgcggcgagaaagtcggcgtggtgaaggttcggctg
taccggccgttctgtgcgcagcatctgctggcggcgattccgcaaagcgcgcagtccatc
gcggtactggaccgcaccaaagaacccggcgcccaggctgaaccgctgtatctggacgta
atgaccgcgctggcggaggcgttctcgcgaggtgagcgcccacttatgccgaaggtgatc
ggcggccgttacggtctgtcttcgaaagaattcaccccgcagtgcgtcgaggcgacgtat
aaagagttagcgcttactaaccccagaccgcgttttaccgtcggtatttatgacgatatc
acccacctgtcgttgccgctgtccgagcagccgatgccgacgcaggcgtcgctggaagcg
ctgttctacgggctgggcagcgacggcaccgtgtccgccgccaaaaactcgatcaaaatc
gtcggtaattcgaccccgctgttcgtgcagggctatttcgtttacgactccaaaaaagcc
ggtagcctgacggtttcccacatgcgcgtcggcccgcacccgattcattccgcctacctg
attgaacaggcggatttcgtggcctgccaccagtggcagttcatcgacaaatacagcatg
gtggagcgcctgaaaccgggcggcatcttcctgatcaacacgccttacagcgccgacgac
ctgtggcaccggctgccgcaggaagtacaggccggtctgaaccagcgtcaggcgcgggtg
ttctgcatcaatgcggcgaaaatcgcccgcgaatgtcagttgggcgcgcgcatcaacacc
gtgatgcagatggcgttcttccacctgacgcaaatcctgccgggcggcgacgcgctcgac
aaactgcgcgccgccatcgccagcagctacggcagcaaaggccaggaactggtggaacgc
aactggcgcgcgctggacgcgacgctggccgcgctggaagcgctggcgctggagccggtg
aatccggacagcccgtgccgcccgccggtggtctccgacgccgcgcccgatttcgtcaaa
accgtcaccgccgcgatgctggccggtctgggcgacagcctgccggtgtccgccctgcca
ccggacggcacctggccggtcggcaccacccagtgggaaaagcgcaacatcgccgaagag
attccgttgtggaaaccggatctgtgtacccagtgcaaccactgcgtggccgcctgcccg
cactccgctatccgcgccaaggtagtgcccgccgacgcgatggccgacgccccagcgtcg
ctgcagtcgctggacgtgaaagcccgcgacatgcgcggtcagaagtatgtgctgcaggtc
gcgccggaagattgcaccggctgtaatctgtgcgtggaagtgtgcccggccaaagatcgc
cagaatccggaaatcaaggccatcaacatggaatcgcgtctggaccatgtggcgaccgag
aaaacccattacgatttcttcctcaaactgccggaaatcgaccgcagcaaactggagcgc
atcgatatccgtacctcgcagttgattacgccgctgttcgagtactccggcgcctgttcc
ggctgcggcgaaaccccgtacataaagctgctgacccagctgtacggcgatcgtctgctg
gtggccaacgccaccggctgttcctcgatttacggcggcaacctgccgacaacgccctgg
accaccgatgccaacggccgcgggccggcatgggccaactcgctgtttgaagacaacgcc
gagttcgggctgggcttccgcctgagcgtcgaccagcatcgccagcgcgccctgcgcctg
ctggatcagctcaagccgcaattgcctgccgatgtggtggccgacctgctggaagaatcc
gttgctgccgatacgcgccgcgaacagattgcccgcctgcgtcagtcactcagcgccatc
gacagcgccgacgctcgtcaactgatagaggaagccgatcatctggtggataaatccatc
tggctgattggcggcgacggctgggcctacgatatcggctacggtggtcttgaccacgtg
atgagcctgtcggaaaacgttaacgtgctggtgctcgacacccagtgctattccaacacc
ggcggccagcaatccaaagccaccccgctcggcgccgtcaccaagtttggcgagaatggc
aaacgcaaggcgcgtaaagacctcggcatcaacgtgatgatgtacggccacgtctacgtg
gcgcagatatcgctgggcgcccagcttaaccagacggtgaaggcgattcaggaagcggaa
gcctggccgggtccgtcgctgatcatcgcctacagcccttgcgaagagcatggctacgat
ctggcgttcagccacgaccagatgcgccagttgaccgctaccggcttctggccgctgtac
cgcttcgacccgcgccgcacggcggaaggcaaaccggcgctggtgacggattcccgtccg
ccgtcagccagcctgagcgaaactctgctcaacgagcaacgattccgccggctcaatagc
cagcagccggaggccgccgccctgttgtatgaagaagccgaggcggatctgcgccgccgc
tatgacttcctcagcctgctggcgggcaaggcagagaaaaacgcccaggaataa
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