Deinococcus geothermalis: Dgeo_0823
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Entry
Dgeo_0823 CDS
T00353
Name
(GenBank) SbcC, ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
dge
Deinococcus geothermalis
Brite
KEGG Orthology (KO) [BR:
dge00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dge03400
]
Dgeo_0823
DNA repair and recombination proteins [BR:
dge03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dgeo_0823
Archaeal homologous recombinant proteins
Dgeo_0823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
AAA_15
ABC_tran
Fucose_iso_C
E7
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
ABF45125
UniProt:
Q1J059
LinkDB
All DBs
Position
complement(879944..882676)
Genome browser
AA seq
910 aa
AA seq
DB search
MRPLSLELQGFTAFRQHTTLDFSDLELFALVGPTGSGKSSLLDAMTFALYGTTPRLGSTG
LDALISQGERGLSVSLTFEVGGETYRVARSKGRRQAENEVRLERREEGRWVNLSDGGTKA
VNDRIRRVVGLDFRTFARSVLLPQGEFSRLLHGTGKERQALLGELMGLDHVKAMHAFAGE
RAKEFKHTLGSLHALLEGEYAGVTEAAVRALRAERETVEAEAEHLQDTREQLQGQVNRLR
VLEGVWTTRENTARRLGILEARAANVREGDERAARARRVAGVLPLLDAAERARIAAAREA
EEARRAAEAEAVARRAVEVAEAALEAAREAEARIPELEARADALREAEADAARLRRAGGT
PQTTHPSPLPWDEDAHFAAREAAQKLEKLRQERIQLEAQKAALEAGRERQKAEQAQQQTL
QQEQRRVEREGKQAKADHDRAQAEWQAARLTAGLSAYRAHLHVGEPCPLCEQTVRVLPQA
SAVDLAALERQVTALQGTLENRRLRYKEIGLELVNLKKSIEARSAELADWEAALEQRELD
LRQLEAQISGDPHDLALRLLAGLAQRVRAAGPDPARERQKRLVEIKSIRDRLNEAQTALA
RAQSAHAASAATLTSAGNAAGSRSREAQDAQTALEEALAALGLDAAQARAAALPEADIAA
LEQAARSHAAQVEQLKVQLAELDRQLGLEPFDPAQLRQAERDLIATDAALSRVRERAGSL
AEQERSARERLGRKAEIEARAKDLAAKLDTWQTLTNTLRANEFQQYLLAEVEARLLTGAG
ALLYEISDGRYRLALENGEYVVQDLWNAGETRGVKTLSGGETFLASLSLAIALSDYLAGN
KILGALFLDEGFGTLDPQALEAVAGALENLRTQGRMVGVVTHVESLSERLPSRLVVTKSV
AGSSVQRLDG
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccctttccctcgaacttcagggcttcaccgcctttcggcagcacaccaccctc
gacttttccgacctggagctgttcgcgctggtggggccgacaggcagcggcaaaagcagc
ctgctggacgcgatgacctttgcgctgtacggcacgacgccgcggctaggaagcaccggg
ctagacgcgctgatctcgcagggcgagcgggggctgtcggtcagcctaacctttgaggtg
ggcggcgagacgtaccgggtggcgcgctccaagggccggcgccaggccgagaacgaagtg
cggctggagcggcgtgaggaggggcgctgggtcaacctcagtgacggcggcaccaaagcg
gtgaatgaccgcattcgccgggtggtggggttggactttcgaaccttcgcgcgcagcgtg
ctgctgccgcagggcgaattcagccggctgctgcacggcaccggcaaggagcgccaggcg
ctgctgggcgagctgatgggcctagaccatgtgaaggcgatgcacgcctttgcgggggaa
cgcgccaaggaattcaagcatacgctgggcagcctacacgcgctgctggagggcgaatac
gccggtgtgaccgaggcggcggtccgggccttgcgggccgaacgcgaaacggtggaggcc
gaagccgagcacctgcaagacacacgggaacagctccaggggcaggtaaaccgcctgcgc
gtgttggagggcgtctggaccacccgcgagaacactgcgcgccgcctgggcatcctcgaa
gcccgagcggcaaacgtgcgcgagggggacgagcgagcagcgcgggcacggcgggtggcg
ggcgtgctgccgctgctggacgctgccgagcgcgcccgcattgcggcggcgcgggaagcg
gaggaagcccgccgcgccgcagaggctgaggcagtggcccgccgggcggtggaggtggca
gaggcggcgctggaagcggcccgggaggccgaggcccgcattcctgagctggaggcgcga
gccgacgcgctgcgcgaggccgaggccgacgcagcccgcctgaggcgcgcgggaggcacc
ccgcaaaccacccatccctctccccttccctgggatgaggacgcgcacttcgccgctcgc
gaagcagcccagaagctggaaaagctgcggcaggagcgcatccaactggaagcgcagaag
gccgcgctggaagcgggccgcgaacgacaaaaggccgagcaagcgcagcagcaaacgctc
cagcaagaacaacgtcgggtcgaacgcgagggcaagcaggccaaggccgaccacgaccgg
gcgcaggcagagtggcaggctgcgcggctgacagcgggcctgagtgcctaccgcgctcac
ctgcatgtgggtgaaccctgcccgctgtgtgagcagacggtgcgggtgctgccgcaagca
tccgccgtggatcttgccgcgctggaacggcaggtgacggcgctccagggcacgctcgaa
aaccgccgcctacgctacaaggaaattgggctagaactcgtcaacctgaaaaaatccatc
gaggcccgcagcgccgagctggccgactgggaggcggcactggaacagcgagaactcgac
ctgaggcagcttgaggcgcagatcagcggcgatccacacgacctcgcgctgcgcttgctg
gctggactggcgcagcgggtgcgggcggcgggaccggacccagcccgtgaacggcagaaa
cggctggtggagatcaagagcatccgcgaccggctgaatgaggcgcaaaccgcgctcgcc
cgcgcgcagagtgcccatgcggcttcagcggccaccttgacctcggcgggaaatgccgcc
gggagccgttcccgtgaggcgcaggacgcgcagaccgcactagaggaggccctcgccgcc
ctggggctagacgccgcccaggcccgcgccgccgccctccccgaagcggacatcgccgcg
ctggaacaggctgcgcgcagccacgccgcgcaggtcgagcaactcaaagtccagctcgcc
gaactggaccggcaactgggtctggaaccctttgatcccgcgcagctccgccaagccgaa
cgcgacctgatcgccaccgacgccgccctcagccgggtgcgcgagcgggctgggagcctg
gccgagcaggaacgcagcgcccgtgaacgcctggggcgcaaggcggagattgaggcgcga
gcaaaggacctggccgccaaactggacacctggcagacactcacgaacacgctgcgggcc
aatgagttccagcagtacctcctcgcggaggtggaggcgcgactgctgacgggagcgggt
gccctgctgtacgagatcagcgacgggcgctaccgcctcgccctggagaacggcgagtac
gtcgtacaggacctctggaatgcgggcgagacgcgcggcgtaaaaacactttctggcggt
gaaacgttcctcgcgagcctcagtctcgccatcgccctcagcgattacttggcgggaaac
aagattctgggtgctctgtttctggatgagggcttcggcacactggacccgcaagcactc
gaagctgtggcgggcgcactggaaaatctgcggacgcaggggcgaatggtgggtgtggtc
acccacgtagagagcctttcggaacggctccccagtcgcttggtcgtcaccaagagcgtg
gcgggaagcagcgtgcagcggctggacgggtga
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