KEGG   Megalodesulfovibrio gigas: DGI_1867
Entry
DGI_1867          CDS       T02851                                 
Symbol
cas3
Name
(GenBank) putative CRISPR-associated helicase Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dgg  Megalodesulfovibrio gigas
Brite
KEGG Orthology (KO) [BR:dgg00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dgg02048]
    DGI_1867 (cas3)
Enzymes [BR:dgg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     DGI_1867 (cas3)
Prokaryotic defense system [BR:dgg02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    DGI_1867 (cas3)
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C DEAD Cas3_HD ResIII
Other DBs
NCBI-ProteinID: AGW13656
UniProt: T2GC13
LinkDB
Position
1987391..1990720
AA seq 1109 aa
MNILIVSECTGNAIKETQRILDQFSERRGSRTWQTAITHAGLETLHRLLRKTARKNTAVA
CYWIRGIDHSELLWIVGATDRFNAQGVVPTNETTRNILRSRDENDWHTLRQIYLLSALAA
LWHDLGKACDEFQKRLRQKAIPTRNLLRHEWIALRIFQAFVGKGSDQDWLDRLARQDIIA
SKQLLHAVQADGLTATSPAPFRNMPPLAQAVGWLIVTHHRLPQLPKESRQGFQAAMLEDI
PGNITAEWNERVDRSDATALKAYWQFKHGLPMDLPAWRERAAKHARRLLELPAEQWAHSL
DNPYVMHLSRLALTLADHEYSSRESSEDRNSRKSESLLYANTNKSRQLKQPLEEHLLGVE
KCCGDIAYALPRLAEELPRLARHRGLRQRTAVERFRWQNKAADLAEGIRERTATQGAFLV
NMASTGCGKTLANARILHALADPAKGMRCVFALGLRTLTLQTGREYRERLHLGEDVVAIR
VGGGALWELPDHQGHQDHQGNQGQEDSGSESAQRLLPEDGQVFFEGAADAHPVLRRMLNE
PNSRALLTAPLLTCTIDHLVPATESLRGGHQLLPMLRLLSSDLVLDELDDYGIEDLPAVA
RLVHWAGMLGSRVLISSATLPPALVQGMFEAYREGRRVFQHNRGQRPGEAPDMCCVWIDE
FQATAKDCATMDAFAQAHIAFATKRGERIGRAPAIRRAAVLPVSIACGQSEKIRQEYARI
ILGGVLQLHAQHHMPDPVSGARVSFGLVRMANIGPLREVAQALYQLELPENIRIHVCVYH
SQYPLLMRSGIEQLLDKALQRKDPLAVFKLSDVRQRLDASPACEHIFLVLGSPVTEVGRD
HDYDWAVVEPSSMRSLIQLAGRILRHRLLLCTSPNILMLSRNIRSLEHPGEPAFQKPGFE
TAHGFALNSHELEELLRPEQYAVIDARPRILAPEVLRPAESLVDLEHARLARLMQQPAVP
VLTPREQRAGGKAVAPVGAYSWWRQPRGMLTGLLQREQPFRKQTRPEVELVLLPNEDEDD
WVLHEIKEEHGQRSFESRASRLKSPDLASSPQVQPWGQVDYLAALKELAESLDMPLEVCA
KKFGTVTLPELKSDGTYSFHPALGFGVDK
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgaatatcctcattgtgtccgaatgtactggaaatgccatcaaggaaacgcagcggatt
ctggatcagttttccgaacgccggggctcccgaacatggcagacggccatcacgcatgca
gggttggagacgctgcatcgtctgctgcgcaaaacggcgcgcaaaaatactgcagtggcc
tgctactggattcgtggaatagatcattccgagctcctgtggattgtcggggcaacagat
cggttcaatgcccagggggttgttccgaccaatgaaacaacccgcaacatcctccgttcc
agagatgaaaatgattggcacacgttgcgccagatctatctactgtctgccctggcggcc
ctgtggcatgacctgggcaaggcgtgcgacgaatttcaaaagcgactgcggcagaaagcg
attcccacgcgcaatctgctgcggcatgaatggattgctctgcggattttccaggcattc
gttggcaagggcagtgatcaagactggctggatcgactggccaggcaggacattattgct
tcaaaacagttgttgcacgctgtgcaggctgacggcctgacggcgacatcgccggcgccg
ttccgcaatatgcctcccctggcccaggcggtaggctggctgatcgtgacgcatcaccga
ctgcctcaactgcccaaggaatcccgccaagggtttcaggcggcaatgcttgaggatatt
ccaggcaacatcactgccgagtggaacgagcgtgtggacaggtctgatgcaacagcgctc
aaggcgtattggcagttcaagcatggcctgcccatggacctgccggcctggagggaacgg
gcggccaaacacgcgcgccggctgctggagctcccggcagagcagtgggcacatagcctg
gacaacccgtatgtcatgcatctgtcccggttggcgctgaccctggccgatcatgaatat
tcgagccgagaatccagtgaagatcgaaattccaggaagtcagagagccttctctatgcc
aacacgaacaagtctcggcagttgaagcagccgctggaggaacacctgctcggcgtggaa
aagtgctgcggggatattgcctatgccctgcccaggctggccgaggagctgccgcgactg
gcccggcataggggattgcgccaacgcacggccgttgaacgctttcggtggcaaaacaag
gcggcggatttggcggaaggcatccgtgaacgcacggcaacccagggggcctttctcgtc
aacatggcttccaccggctgcggcaaaaccctggccaatgcgcgcatccttcatgctctt
gccgatcccgccaaaggcatgcgctgtgtgtttgcgctggggttgcgcaccctgaccctg
caaaccgggcgcgagtatcgcgaacgcctgcacctgggcgaagacgtcgtggccatccgg
gtcggtggcggggccctctgggagttgcccgaccatcaaggccatcaagaccatcagggc
aatcagggccaggaagattccggcagcgagtctgcacagcgcctgcttcccgaggatgga
caggtctttttcgaaggggcagcggatgcccacccggtgctgcggcggatgctgaacgag
cccaactcccgggcactgctgactgcgccgctgttgacctgcaccattgatcatctggtc
ccggccacggagagtctgcggggagggcatcaactgctccccatgctccggctgctgagc
agtgatcttgtgctggacgaactggacgactacggcattgaggatttgcctgccgtggca
aggctggtgcactgggccggcatgcttggctcccgggtgctcatttcctcggccaccctg
ccgcctgccctggtgcagggcatgttcgaggcctaccgtgaaggccgccgcgtgttccaa
cacaatcgggggcaacgccccggtgaagcgccggacatgtgctgcgtctggattgatgaa
ttccaggccacggccaaggactgcgccaccatggacgcctttgcccaggcccacatcgcg
tttgccaccaaacgtggggaaaggatcggtcgggcccccgccatccgtcgtgctgccgtg
ctccccgtgtccattgcctgcggacagtcggaaaagatccgccaggaatacgcccgcatc
attctggggggcgtcctgcaattgcatgcgcagcaccatatgccggatcccgtcagcggc
gcccgcgtcagcttcgggctggtgcgcatggccaatatcggccccctgcgcgaggtggcc
caggccttgtaccagctcgaacttccagaaaatatccgcatccatgtgtgtgtgtatcat
tcccagtatccgctgctgatgcgttcgggcattgaacagcttctggacaaggcgctgcag
cgcaaggatccccttgccgtcttcaaattgtcggacgtccgccagcgtctggatgccagt
ccagcctgtgagcacatctttctggtgcttggttcgccggtgacggaggtcggacgggac
catgactacgactgggccgtggtcgagccgtcttccatgcgttcgctcatccagcttgcc
gggcgcatcctccggcaccgactccttctgtgcacctcgcccaacatcctcatgctctca
cgcaacatcagaagcctggaacaccctggagagcccgcctttcagaaacctggattcgag
acagcacacggcttcgcacttaacagccatgagttggaggaactactgcggccggagcag
tatgcagtcattgacgcccgcccccgcattctcgcgccagaggtgctgcgccctgccgaa
agtctggttgatcttgagcacgcgcggcttgcccggctcatgcagcagccggcggtgccg
gtgctcaccccgcgcgagcagcgtgccgggggcaaggccgttgcccccgtgggggcctat
agctggtggcggcagccgcgcggcatgctcaccggtctgctgcagcgcgaacagccgttt
cggaaacagacccgtcctgaagtggagcttgtcctgctccccaatgaggacgaggatgac
tgggtgctgcacgagatcaaggaggagcatgggcagcgttcgttcgagtctcgggcctcc
cgcctgaaaagtcctgaccttgcgtcctccccgcaggtgcagccctgggggcaggtggac
tatctggctgctctgaaggaactggcggaatcgttggacatgcctcttgaggtatgcgcc
aaaaagttcggcaccgtgacgttgccggaactgaaaagcgatgggacgtattccttccat
ccggctttggggtttggggttgataaatag

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