Desulfoscipio gibsoniae: Desgi_1163
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Entry
Desgi_1163 CDS
T02657
Name
(GenBank) Pyridine nucleotide-disulfide oxidoreductase
KO
K03388
heterodisulfide reductase subunit A2 [EC:
1.8.7.3
1.8.98.4
1.8.98.5
1.8.98.6
]
Organism
dgi
Desulfoscipio gibsoniae
Pathway
dgi00680
Methane metabolism
dgi01100
Metabolic pathways
dgi01120
Microbial metabolism in diverse environments
dgi01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
dgi00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Desgi_1163
Enzymes [BR:
dgi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.7 With an iron-sulfur protein as acceptor
1.8.7.3 ferredoxin:CoB-CoM heterodisulfide reductase
Desgi_1163
1.8.98 With other, known, physiological acceptors
1.8.98.4 coenzyme F420:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_1163
1.8.98.5 H2:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_1163
1.8.98.6 formate:CoB-CoM heterodisulfide,ferredoxin reductase
Desgi_1163
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer4
FAD_oxidored
NAD_binding_8
FAD_binding_2
Fer4_7
DAO
Pyr_redox
GIDA
Fer4_9
HI0933_like
Pyr_redox_3
Fer4_16
Fer4_2
FAD_binding_3
Fer4_21
Fer4_10
AlaDh_PNT_C
Fer4_6
Thi4
Lycopene_cycl
3HCDH_N
Amino_oxidase
Fer4_17
Fer4_15
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
AGL00686
UniProt:
R4KM16
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All DBs
Position
1192859..1195915
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AA seq
1018 aa
AA seq
DB search
MTHQKIGAVLVIGGGVAGIQSALDLAESGYYVYLVEKSPAIGGVMAQLDKTFPTNDCSMC
ILSPKLVESGRHGNIELITDAQVDGVQGEPGNFTVRVRVKPRYVAIDKCVSCGVCAEKCP
VKVPDTFNVGLSERKAIYTKYAQAVPSAYVIDSEYCLYLTKGREKGKDICKLCVKHCKSN
AIDFDQVEEIRDVNVGAIIISSGLKPFNPKDFRNYGYGIFPNVMTSIEFERVLSASGPSA
GHLERPSDGQPPRRIAWIQCVGSRDVAKSANAYCSSVCCTYALKEAIVALEHAHGELDTT
IFYMDMRTFGKDFERYLERAKYEFGVRLIRSRVFALAEGENHSLTIRYALPDGQVQTEEF
DLVVLSVGLGPAEHNRELADKLGVRLNKYGFCQYPNFNPVSTSQDGIFACGAFQGPMSIP
RAVVQASAAAGNAAAMLAGVRNTLIKKQSKTPERDVAGKEPRVGVFVCRCGINIGAVVDV
PAVAEFARTLPGVVHAEECLFACSQDNQQNIKQLIADKDLNRVVVASCTPRTHEPMFRQT
LREAGLNPYLFEMANIREHCSWVHANNSEVATQKAKSLVKRAVSRVVLQEPLYEIDLGVK
QSALVVGGGVAGMECALDLAKQGIQVYLLEKNSELGGLTRRIHYTMDRRDVKSYLNSLIA
EVTGHPLVKVYCNAVINNVYGYVGNYITGFTTPAGKQEVNHGVAVIAIGGAEYKPVEYLY
GQDQRVMTCLDLEGLIWENNPVLKKASNVVMIQCVGSREPDRPYCSRVCCSESVKNAIKL
KESYPQLNVFVLCRDMRTFGFFEGLYQKARRMGVIFIKYSQDLKPQVEQVPAGDGTVLQV
TVKDHILDRPVVINADIVALAAAILAPEDGSHIAGFFKVPRNDEGFFLEAHVKLRPVDFT
TDGVFMCGLAHAPKLIDESIAQGKAAAARAMTVLSSENLVAGGVVSVIDKDKCSGCRICV
GLCPYSAISFNEKLKVAEINQALCKGCGVCASACPTKACHTRNFSDEIILAEIHALCT
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
ttgactcaccaaaaaattggtgcggtgcttgtgattggcggtggggtggccggtattcaa
tcagctctggacttggcggaatcgggttactatgtttacctggtggaaaaatctccggcc
attgggggagtgatggcgcagctggataaaacttttcccaccaacgactgctccatgtgt
attctttcgcccaagctggtggagagcggcaggcacggcaatatagagctgattaccgat
gctcaagttgacggtgtacaaggggagcccggtaattttacggtcagagtacgggttaag
ccccgctacgtggctattgataaatgtgtgagctgtggtgtgtgcgctgaaaagtgtccc
gttaaagtgcccgatacatttaatgtgggcttaagcgagcgcaaggctatttacaccaag
tatgcccaggctgtgccctcggcctatgtaattgatagtgagtactgcctgtatctcacc
aaaggccgggaaaagggcaaggatatctgcaagctgtgcgtcaagcattgtaagagcaat
gccatagactttgatcaggtggaagaaattagagacgttaatgtgggggcaattataatt
agctcggggctgaagccctttaaccccaaagattttcgcaactatggctacggtatattc
cccaatgtgatgaccagtatagagtttgagcgggttttgagtgcttccggtccctcggcg
ggacacctggaaaggccatcggacgggcagccaccacgccgtatcgcctggatacagtgc
gtgggctcacgggatgtagctaaaagtgccaacgcttattgctcatcggtatgctgtact
tatgctttaaaagaggctattgtggcattggagcatgcccatggtgagctggataccact
attttttacatggatatgcgcaccttcggtaaggactttgaacgctatctggagcgggca
aaatatgaatttggtgtgcgcctgatccgctcgcgcgtatttgcgctggccgaaggggag
aatcacagcctgaccatcaggtacgccctgcccgacggtcaggtacagaccgaagagttc
gacctggtggtattatctgttggtctcggcccggctgaacataatcgcgaactagccgac
aagctgggtgtgcggcttaataaatacggtttttgccagtaccccaatttcaacccggtg
agtacatctcaggatggtatctttgcctgcggcgctttccagggtccgatgagtataccc
cgcgctgtggtacaggcgagtgccgcggccggcaatgctgcggctatgctggccggggtg
agaaatacgctgattaaaaaacaatccaagacaccagaaagggatgttgcgggtaaagaa
ccccgggtgggtgtttttgtgtgtcgctgcggcattaatattggtgcggtggtggatgtg
ccggcagtggctgaatttgcccgtactttgcccggagtggtgcatgccgaggagtgcttg
tttgcgtgttcccaggataaccagcaaaatatcaagcaattgatagctgataaagattta
aaccgtgtggtggtagcctcctgtacgccgcgcacccacgagcccatgttccggcagaca
ctgcgggaggcgggcctgaacccgtacttgtttgaaatggccaatatccgggagcattgt
tcctgggtgcacgccaacaacagtgaggtggccacccaaaaggccaaaagcctggtgaag
cgggcggtgtcccgggtggtgctgcaagagccgctgtatgaaatcgatctgggcgttaaa
cagtcggcgctggtggtgggcggcggagtagccggtatggaatgcgcgctggatttggcc
aaacagggcatccaggtataccttttggaaaagaatagcgagctgggcgggctaaccagg
cgcatccactatacaatggacaggcgcgacgtgaagagctatttaaattctctcattgca
gaagttaccggtcacccgctggttaaagtgtattgcaatgcagtaattaacaacgtatac
ggttatgtgggcaattatatcaccggtttcaccaccccggcaggtaagcaagaggtgaac
cacggggtggctgtaattgccatcggaggtgcggaatataaacccgtagagtatctatac
ggccaggaccagcgggtgatgacctgtcttgatttggaagggctgatttgggaaaacaac
cctgttctgaaaaaggccagcaatgtggtaatgatacagtgcgtgggctcccgggagccc
gatcgcccctattgcagccgggtatgctgttcggagagcgtcaagaatgctattaaactg
aaagagtcttatccacagctcaatgtgttcgtactgtgccgggatatgcgtaccttcgga
ttcttcgaggggctttaccagaaagcccggcgcatgggggtcatcttcattaagtattcc
caggatttaaagccacaggtggaacaggttccggccggggacggcactgtgctgcaggtg
acagttaaggaccacatactggaccggccggtggtgattaatgcggatatagtcgccctg
gcggccgctatactggcccctgaagatggttctcacatagccggcttttttaaggtgccc
cgcaacgatgagggatttttcctggaggctcatgtcaagctgcgcccggtggattttacc
accgacggtgtttttatgtgcgggctggctcatgctcctaaattaatcgatgaaagcatt
gcccagggcaaggcggccgcggcccgtgctatgacggtgctttccagcgaaaacctggtg
gccggcggggtggtgtcagtaattgataaggataaatgttcgggttgccggatttgcgtg
gggttgtgtccttattcagccatttcctttaatgagaagctgaaagtggccgaaataaac
caggccctttgcaaaggctgcggagtgtgtgcttcggcttgccccactaaagcatgtcat
accaggaacttcagtgatgaaattatcctggctgagatacatgctttatgcacctga
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