KEGG   Delftia sp. HK171: BO996_06175
Entry
BO996_06175       CDS       T04584                                 
Name
(GenBank) type I-F CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dhk  Delftia sp. HK171
Brite
KEGG Orthology (KO) [BR:dhk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dhk02048]
    BO996_06175
Enzymes [BR:dhk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BO996_06175
Prokaryotic defense system [BR:dhk02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    BO996_06175
SSDB
Motif
Pfam: Cas3_I-F_Cas2 Cas3-like_C Cas3_HD HD
Other DBs
NCBI-ProteinID: APE47467
LinkDB
Position
1372474..1375962
AA seq 1162 aa
MNVLFVSQCSKRALTETRRILDQFAERRGDRTWQTPITAAGLDTVRKLLRQSARKNTAVA
CHWIRGRDHSELLWIVGGGRQFNAEGAVPTNTTASNVLRAEDESHWHHLPLITALAALAA
LVHDLGKATQAFQDRLNNPGLRERNHYRHEWVSVRLFQAFVGGDSDMAWLQRLAACVDEA
ANARAFEAQWLDHRSGRLLRDGLDEPQASQHLPFKALPPLATAVAWLVLTHHRLPCMPVA
AGRQESDDELEPDRRQWCRFGARPRFVNSNEIEQLLQRITADWNEPREKAEPAKVQAHWD
FPQGLPVATAAWRKQAARYALKLQELAGRSLDAASLGDPFTLHLSRLCLMLADHHYSSIE
DEARRQPFRNAGYPLYANTRRKSAAPGAASAFNQTLDEHLLGVQAHATLVARSLPTLARS
LPALRSHRGLKKRSSNARFQWQDKAADLAASVRHRAASQGGFIVNMASTGCGKTLGNARI
MNALADPGVGMRCAFAIGLRTLTLQTGRVFQSDLGLGDDQLAIKVGGAASRALFEYWEAQ
AEATGSASRQALLDEGGQVLFDGNDQHPLLQRLTDDAQVRSLIAAPVLACTVDHLTPATE
SLRGGRQIAPMLRLMTGDLVLDEPDDFDMADLPALTRLVHWAGLLGSRVLLSSATLPPAL
VEGLYLAYRAGREIFQRHRGERPGEPVAICCLWVDEFHQQALDCADGAGFRTGHEGFVQK
RVAQLARAEVRRLAAIAPLPAGWQGLDPAARRRDFARIALEHAWQLHQQPGNHGIDPASG
KRVSFGLIRMANIEPLFDVALAMYGQGAPAPGVRVHLCVYHSQFPLLARSSIERHLDTML
DRRTPDGADPIFQRPAIRALLDANNEADHLFIVLGSPVTEVGRDHDYDWAVVEPSSMRSL
IQLAGRVRRHRPGAVQEANMRVLDSNLRAFEHPGRAAFCKPGFEMEPVDDKADTARYFHL
RSHDLQSLLAKHTKGEPLWPVDARARIEVAREQFHPARNLVDLEHARMHDTMLPRPADSP
DATPVLRAASLHWASPACFWLTGLLPQFQRFRYDPLPRVDVVFLPDEEEEGLQLHRVVDG
QRRGDKLHVLVQDSLLHREPLDLRKGTVTAWGQADLMQELLALAEGKGLALDACASKYAT
ASLPDKAQGWRWHGVLGFVGRA
NT seq 3489 nt   +upstreamnt  +downstreamnt
atgaacgtgctcttcgtctcccagtgcagcaagcgcgccctcaccgaaacgcgccgcatc
cttgaccagtttgccgagcggcgcggcgatcgcacctggcagacgcccatcaccgcggct
gggctcgacaccgtgcgcaagctgctgcgccagagcgcgcgcaagaacaccgccgtggcc
tgccactggatacgcgggcgcgaccacagcgaactgctgtggatcgtgggcggcgggcgc
cagttcaacgccgaaggcgccgtgcccaccaacaccacggccagtaacgtgctgcgcgca
gaagacgaaagccactggcaccacctgccactgatcacggcgctggccgctttggcggcc
ctggtgcatgacttgggcaaggccacccaggcattccaggaccggctgaacaatcctggc
ctgcgcgagcgcaaccactaccgccatgaatgggtgtcggtgcggctgttccaggcgttc
gtgggcggcgacagcgacatggcatggctgcaaaggctggcagcctgtgtggatgaggcc
gccaatgcccgggcctttgaggcgcaatggctggatcaccgcagcggccgccttctgcgc
gatggcctggacgagccgcaggccagccagcatctgccgttcaaggcgctgccgccgctg
gccaccgccgtggcctggctggttctgacacaccatcggctgccctgcatgccggtcgct
gcaggccggcaggagtccgacgacgagctggagcccgaccgccgccaatggtgccgcttc
ggcgcgcgcccgcgcttcgtcaacagcaatgagatcgagcagctgctgcagcgcatcaca
gccgactggaacgagccgcgcgagaaagccgagccggcgaaggtgcaggcccattgggac
ttcccgcagggccttccggtggccacggcagcctggcgcaagcaggcggcgcgctatgcg
ctcaagctgcaggagctggcgggccggtcgcttgacgctgcaagcctgggcgatccgttc
acgctgcacctctcgcgcctgtgcctgatgctggccgaccatcactactccagcatcgag
gacgaagcgcgccgccagcctttccgcaacgcgggctatccgctgtacgccaatacccgg
cgcaagagtgcagctccaggcgccgcgtccgctttcaaccagacgctggacgaacacctg
ctgggcgtgcaggcccatgccacgctggtagcgcgctcgctgcccacactggcgcgcagc
ctgccggccctgcgcagccatcgcggcctcaagaagcgcagcagcaacgcgcgcttccag
tggcaggacaaggccgccgacctggctgccagcgtgcgccaccgggccgccagccagggt
ggcttcatcgtcaatatggcctccacaggctgcggcaagacgctgggcaatgcgcgcatc
atgaatgcgctggccgacccgggcgtgggcatgcgctgtgccttcgccatcggcctgcgc
acgctcacgctgcagacggggcgggtgttccagagcgacctgggcctgggcgacgaccag
ctcgccatcaaggtcggcggcgcggccagccgcgcgctgttcgagtactgggaagcgcag
gccgaggccacgggttcggcctcgcgccaggcgctgctcgacgaaggcgggcaagtcctg
tttgacggcaatgaccagcacccgctgctgcagcgcctgaccgacgatgcgcaggtgcgc
tcgctgatcgccgcgcccgtgctggcctgcaccgtggaccacctcacgcccgccactgaa
agcctgcgcggcggccggcagatcgcgcccatgctgcgcctcatgacgggcgacctggtg
ctggacgagcccgatgatttcgacatggccgacctgcccgcgctcacccggctcgtgcac
tgggcgggcctgctcggctcgcgcgtgctgctgtcctcggccacattgccgccagcgctg
gtggaggggctgtacctggcctaccgcgccgggcgcgagatcttccagcgccatcgcggc
gagcggcccggtgagcccgtggccatctgctgcctgtgggtggacgaattccaccagcag
gcactggactgcgccgatggcgcagggtttcgcacaggccatgaaggctttgtgcaaaag
cgcgtggcccagctcgcccgggccgaggtgcggcgcctggctgccatcgctcccctgcct
gccggctggcagggactggacccggccgcgcggcgccgggattttgcgcgcatcgcgctg
gagcatgcatggcagttgcaccagcagccgggcaaccatggcatcgaccccgccagtggc
aagcgtgtgagcttcggcctcatccgcatggccaacatcgagccgctgttcgacgtggcc
ctggcaatgtacggccagggcgctcctgcaccgggcgtgcgtgtgcacctgtgcgtctac
cactcgcagtttccgctgctggcgcgttccagcatcgagcggcacctggacaccatgctg
gaccgccgcacccccgacggcgcagaccccatcttccagaggccggccatccgcgcattg
cttgatgccaacaatgaggccgatcacctcttcatcgtgctcggctcccccgtcaccgaa
gtgggccgcgaccacgactatgactgggccgtggtcgagccctcgtccatgcgctcgctg
atccagctggccggacgcgtgcggcgccaccggccgggtgcggtgcaggaggccaacatg
cgggtgctggacagcaacctgcgcgctttcgagcatccaggccgggcggcattctgcaag
ccgggtttcgagatggagccggtggatgacaaggcggacacggcgcggtacttccacctg
cgctcgcatgacctgcaatcgctgctggccaagcacaccaagggcgagcccctctggccc
gtggatgcccgcgcccgcatcgaagtggccagggagcagttccacccggccaggaacctc
gtggacctggaacacgcccgcatgcacgacaccatgctgccgcgccccgcagacagcccg
gatgccacgccggttttgcgcgccgccagcctgcactgggccagccctgcctgcttctgg
ctcacgggcctgctgccgcagttccagcgctttcgctacgacccgttgccgcgcgtggat
gtggtgtttctgccggacgaggaggaagagggcctgcaactgcaccgcgtggtcgatggc
cagcggcggggcgacaagctccatgtgctggtgcaggacagcctgctgcaccgggagccc
ttggacttacggaaggggacggtcactgcatgggggcaggccgacctgatgcaggaactg
ttagccctggcggagggcaaggggctggcgctggatgcctgtgcaagcaagtacgccacg
gccagcctgcccgacaaggcacagggctggcgctggcatggcgtgctgggctttgtgggc
cgggcctga

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