Delftia sp. HK171: BO996_07455
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Entry
BO996_07455 CDS
T04584
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dhk
Delftia sp. HK171
Brite
KEGG Orthology (KO) [BR:
dhk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dhk03016
]
BO996_07455
Enzymes [BR:
dhk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
BO996_07455
Transfer RNA biogenesis [BR:
dhk03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BO996_07455
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Myosin_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
APE47704
LinkDB
All DBs
Position
complement(1665255..1667333)
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AA seq
692 aa
AA seq
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MHALFEESGKFLAGRILSEADTSAQVELDSGKRVKVKSANILLKFDKPAPAELIAQAQAQ
AAQIDLDLAWEFAPEEEFGFADLARDYFSDKATLAEQAGALFRLYDAPHYFRRSGKGRFK
KAPAEILQQALAGIEKKKQIQAQITAWAEQLGAGECPGPIREQLYKILFRPDKNAAEYKA
VVEASRATRLAPLDLLHRAGAIESAYEFHWKRFLFDHFPKGTQFPALQAPQPPADLPLAE
VQAFSIDDSATTEIDDALSVRGLGTGTVTVGIHIAAPGLAIVPGTPLDQLGRSRLSTVYM
PGYKITMLPDEVVQIYTLDEGRANPAVSLYVTVDEATLETTASETRLERVPVQVNFRHDK
LDHIVTEQWLADPSFEVEGTPEVLQGKRAELTFLQRWAKHLKAGRELVRGKPENFNRPDY
NFRLVGNGGAEPRGNEQVEISVRKRGAPLDLIVAEAAIVANSTWGGWMAELGVPGIYRSQ
ASLAPGIKVRMSTKAQPHAGIGVKSYAWATSPLRRYVDLVNQWQIIACARHGKTAALAAP
FKPKDAELFGIISSFDGAYSAYNGYQAGMERFWTLKYLQQHAITELTATVIKEGMGGGLL
VRADDLPLVFPVLGVTGLPRGAHVRVRLGEIDEIALDVSGTLIERLDGDAAAAADGAEDS
AEDDEEAVAGPIAIAVDMNETDGTPAADPAQP
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcattgtttgaagaatccggcaagttcctggccggccgcatcctctccgaagcc
gacacctccgcccaggtggagctggactcgggcaaacgggtcaaggtcaagtcggccaac
atcctgctcaagttcgacaagccggcgcctgccgaactgatcgcccaggcgcaggcgcag
gccgcccagatcgatctggacctggcctgggaattcgcccccgaggaggaattcggcttc
gccgaccttgcacgcgactatttctcggacaaggccacgctggccgagcaggccggcgcg
ctgttccgtctctacgacgcaccgcactacttccgccgctccggcaaaggccgcttcaag
aaggcgccggccgagatcctgcagcaggcgctggccggcatagagaagaaaaagcagatc
caggcccagatcacggcctgggccgaacagctgggcgccggcgaatgccccggccccatc
cgcgagcagctctacaagatcctgttccgccccgacaagaacgccgccgaatacaaggcc
gtggtcgaggccagccgcgccacgcgcctggcaccgctggacctgctgcacagggccggc
gccattgaatcggcctacgagttccactggaagcgcttcctgttcgaccacttccccaag
ggcacgcagttcccggccctgcaggcaccccagccaccggccgacctgccgctggccgag
gtccaggcgttttccatcgatgactcggccaccaccgaaatcgacgatgcgctgtcggtg
cgcggcctgggcacgggcacggtcaccgtgggtatccacatcgccgcgcccggtctggcc
atcgtgccgggcacgccgctggaccagctcggccgctcgcgcctgtccaccgtctacatg
cccggctacaagatcaccatgctgcccgacgaggtggtgcagatctacacgctggacgaa
ggccgcgccaaccccgccgtgtcgctgtacgtcaccgtggacgaggccacgctggagacc
acggccagcgagacgcgcctggagcgcgtgcccgtgcaggtcaacttccgccatgacaag
ctggaccacatcgtcaccgagcagtggctggccgacccctccttcgaggtcgagggcacg
cccgaagtgctgcaaggcaagcgcgccgaactgacgttcctgcagcgctgggccaagcac
ctgaaggccgggcgcgaactggtgcgcggcaagcccgagaacttcaaccgccccgactac
aacttccgcctcgtgggcaacggcggcgccgagccccgcggcaacgagcaggtggagatc
agcgtgcgcaagcgcggcgcgccgctggacctgatcgtggccgaggccgccatcgtggcc
aacagcacctggggcggctggatggccgagctcggcgtgcccggcatctaccgcagccag
gccagcctggcgcccggcatcaaggtgcgcatgtccaccaaggcgcagccccatgcaggc
atcggcgtcaagagctatgcctgggccacctcgccgctgcgccgctacgtggacctggtc
aaccagtggcagatcattgcctgtgcgcgccacggcaagaccgccgccctggctgcgccg
ttcaagcccaaggacgccgagctgttcggcatcatcagcagcttcgacggggcctacagc
gcctacaacggctaccaggccggcatggagcggttctggacgctcaagtacctgcagcag
cacgccatcaccgagctgacggccaccgtcatcaaggaaggcatgggcggcggcctgctg
gtgcgcgccgatgacctgcccctggtcttccccgtgctgggcgtcaccggcctgccgcgc
ggcgcccatgtgcgcgtgcgcctgggcgagatcgacgagatcgcgctcgatgtctcgggc
acgctgatcgagcgcctggatggcgatgcggcggccgctgccgatggcgccgaagacagc
gccgaggatgacgaggaagccgtggccggccccatcgccatcgccgtggacatgaacgag
accgatggcacaccggcggccgaccccgcccagccctga
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