Delftia sp. HK171: BO996_27945 Help Entry BO996_27945       CDS       T04584                                  Name (GenBank) excinuclease ABC subunit A   KO K03701   excinuclease ABC subunit A Organism dhk  Delftia sp. HK171 Pathway dhk03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:dhk00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     BO996_27945  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:dhk03400]     BO996_27945 DNA repair and recombination proteins [BR:dhk03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     GGR (global genome repair) factors      BO996_27945   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      Supressor       BO996_27945 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ABC_tran UvrA_inter AAA_29 SMC_N AAA_21 nSTAND1 AAA_16 RsgA_GTPase AAA_18 AAA_23 AAA_22 AAA_25 Viral_helicase1 NACHT DnaJ_CXXCXGXG UvrA_DNA-bind AAA_33 nSTAND3 DUF4350 SbcC_Walker_B RNA12 Motif Other DBs NCBI-ProteinID:  APE51375 LinkDB All DBs Position complement(6357126..6363083) Genome browser AA seq 1985 aa AA seqDB search MTHGLIRIRGARQHNLQNLDLDIRTGELTVVTGPSGSGKSSLVFDTLYAEGQRRYVETFS AYARQFLDRMDKPAVDRVEGVPPAIAIDQTNPVRNSRSTVGTMTELNDHLKLLFARAAQL FDRDTAVPVRHDTPDSVLEELAERCRQAGDPRIAITFPVELPANTTAAEVEQWLSASGFT KVQAEREAEKAGAVEPAADAKGKKTKAAAPLKVKMLDVVADRFRLGNVERARVYEAIEVA LKRGSGHMTVYVLPESAVEAAGGQPTEPQLWKFSLGLHCPESGLSYQEPIPSLFSFNSAV GACEACRGFGRVIGVDWGLVIPNDKLTLRTGAIKPVQTPAWKEIQDDLMRHAEAEGIPRD TAWAKLTDAQKSWVLDGSPNWNGKWTQTWYGIKRFFEYLESKAYKMHIRVLLSKYRSYTE CPTCGGARLKTESLLWRLGGKQAADAVLPPGDEGRYRRFMPKGVAWSREQLDALPGLCLH DLMQLPLVRLRDFFQQLAPAVDAPLHDGEAQALKMLHAEIMARVQYLCDVGIGYLTLDRQ SRTLSGGEVQRINLTTALGTSLVNTLFVLDEPSIGLHPRDMERITEAMQRLRDAGNTLVV VEHDPAVMFAADRMIDMGPGPGARGGQIVFDGTPEDLRHADTLTGAYLGGRKQVGFGLKR MVTESTPRLILEGAREHNLRSIDVDFPLQRLVTITGVSGSGKSTLIQDVLVPALMRHFGK PTDAAGAFERLLGADHLSDVMFVDQSPIGKTARSNPASYVGAWDSIRELFAIAPLSRQRG YTAAKFSFNSGDGRCPTCGGSGFEHVEMQFLSDVYLRCPDCNGTRYRPEILEVTIERHAV GELQPRKLNVADVLELTVAEAALLFAQDREVIRALQPIVDVGLEYVKLGQPVPTLSGGEA QRLKLAGFLAEAAKSQAKSKQALAKKGTLFLFDEPTTGLHFDDIAKLMRALRKLLEAGHS LIVIEHNLDVIRASDWLIDLGPEGGDGGGGIVAQGTPEEVRQIPGSHTAQALREYDLAMG VGGEAVREVAPMLYKSQRKAHAMSGAAARNAIEIVNAKEHNLKQLSVEIPRGKFNVVTGV SGSGKSTLAFDILFNEGQRRYLESLNAYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRG GRKSTVGTTTEVWHFLRLLYVKLGTQHCIHDGAAVQPQTAESIAAQLLTQFRGQTIGLLA PLVVNRKGVYTELADWARPRGYTHLRVDGEFLPTTGFPRIDRFKEHTIELPVASVTVTAA NERELRGHLAQALETGKGVLHVLSGLDNLADAMAGGRSTAGIGSLQVFSTQRACPVCATS YAELDPRLFSYNSKHGWCPDCVGTGVKLTKDQRKVYDDTLLVEDNRGREVKFEGQEIEDL AEVTCPTCQGTRLNATARAVRFHGVGIAEIAQLSVNDVRQWVQALALSGRESDIARDLIP EIQSRLEFLEEVGLGYLTLDRGAPTLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHA RDNQILLNALHKLGDKGNTLVVVEHDEDTIRRADHIIDIGPSAGIRGGRLVAQGTAADIM AAEDSITGRYLLHAMRHPFQPRRWVGEGQPPQAAAELAAVAEPVPEPAPVKVSKSKKKAA PVVVEAEPASDALSWLTVRGAHLHNLQNVDARVPLKRLVAVTGVSGSGKSTLARDVMLAN VAAWVGQRATKAGRDAMDAGKAPPLSGCKGLQGFEGIDRVLEVDQTPIGKTPRSCPATYI GFWDTIRKLYAETLEAKARGYAAGRFSFNTGEGRCPACEGQGMRTIEMSFLPDVKVPCEV CHGARFNPETLAVSWRGKSIGDVLQMEVDEAVEFFASMPSIAHPLQLLKDVGLGYLTLGQ PSPTLSGGEAQRIKLVTELTKVRDDVTRRGNKAPHTLYVLDEPTVGLHMADVDKLIRVLH RLVDAGHSVVVIEHDLDVIAEADWIIDLGPEGGKDGGRIIAAGTPEDLVAAGTHTGKALK PVLAR NT seq 5958 nt NT seq  +upstreamnt  +downstreamnt atgacgcacggtctgattcgaattcgcggcgcacgccagcacaatctccagaacctggat ctcgacatccgtaccggcgagctgaccgtggtcacggggcccagcggctcgggcaagtcc agcctggtgttcgataccctgtatgccgaaggccagcgccgctatgtcgagaccttctcg gcctatgcgcgccagttcctggaccgcatggacaagccggccgtggaccgtgtggaggga gtgccgccggccatcgccatcgaccagaccaatcccgtccgcaactcgcgctccaccgtg ggcacgatgaccgagctcaacgatcacctgaagctgctgttcgcgcgtgcggcgcagctg ttcgaccgcgacaccgccgtgcccgtgcgccacgacacgcccgacagcgtgctggaggag ctggccgagcgttgccggcaggccggcgatccgcgcatcgccatcaccttccccgtcgag ctgcccgccaacaccacggctgccgaggtggagcaatggctgtcggccagcggcttcacc aaggtccaggccgagcgcgaggcggagaaggcgggcgccgtggagcccgctgcagacgcc aagggcaagaagaccaaggcggcggcgccgctcaaggtcaagatgctggatgtggtggcc gaccgcttccgcctgggcaatgtggagcgggcccgtgtctacgaggccatcgaggtcgcg ctcaagcgcggcagcggccacatgacggtctatgtgctgcctgaatccgccgtggaagcc gcaggtggccagcccaccgagccccagctgtggaagttctcgctgggcctgcactgcccc gaaagcggcctgagctaccaggagccgattccctcgctgttctccttcaactccgccgtg ggcgcctgcgaggcctgccgtggctttggccgcgtgatcggcgtggactgggggctggtc attcccaacgacaagctcaccctgcgcacgggcgccatcaagcccgtgcagacgccggcc tggaaggagatccaggatgacctgatgcgccacgccgaggccgaaggcattccgcgcgac acggcctgggccaagctcaccgatgcgcagaaaagctgggtgctggacggctcgcccaac tggaatggcaagtggacccagacctggtacggcatcaagcgcttcttcgaatacctggag agcaaggcctacaagatgcacatccgggtgctgctgtccaagtaccgcagctataccgaa tgccccacctgcggcggcgcgcgcctgaagaccgaaagcctgctgtggcgcctgggcggc aagcaggccgccgatgccgtgctgccgcccggcgacgaaggccgctaccgccgcttcatg ccgaagggcgtggcctggagccgtgagcagctggacgcgctgccgggcctgtgcctgcac gacctgatgcagctgcccctggtgcggctgcgcgacttcttccagcagctggcgccagca gtcgacgccccattgcatgacggcgaggcccaggcgctcaagatgctgcacgccgaaatc atggcgcgcgtgcagtacctgtgcgacgtgggcatcggctacctcacgctggaccgccag agccgcacgctgtcgggcggcgaggtgcagcgcatcaatctgaccacggccctgggcacc tcgctggtcaacaccctgttcgtgctcgacgagcccagcatcggcctgcacccgcgcgac atggaacgcatcaccgaggccatgcagcgcctgcgcgatgcgggcaacaccctggtcgtg gtcgagcacgacccggccgtgatgttcgccgccgaccgcatgatcgacatgggccccgga cccggcgcgcgcggcggccagatcgtgttcgacggcacgcccgaggacctgcgccatgcc gacacgctgaccggcgcctacctgggcggccgcaagcaggtgggcttcggcctcaagcgc atggtgaccgagtccacgccgcggctcatcctcgaaggcgcgcgcgagcacaacctgcgc agcatcgacgtggactttccgctgcagcgcctggtcaccatcaccggcgtcagcggctcg ggcaagtccacgctgatccaggacgtgctggtgcccgcgctgatgcgccacttcggcaag cccacggatgcggccggcgccttcgagcgcctgctgggcgccgaccacctgagcgacgtg atgttcgtggaccagtcgcccatcggcaagacggcgcgctccaacccggccagctacgtg ggcgcctgggactccatccgcgagctgttcgccattgcgccgctgtcgcgccagcgcggc tacacggccgccaagttcagcttcaacagcggtgacggccgttgccccacctgcggcggc tcgggcttcgagcatgtggagatgcagttcctctccgacgtctacctgcgctgccccgac tgcaacggcacgcgctaccgccccgagatcctggaagtcacgatcgagcgccacgcggtc ggcgagctgcagccgcgcaagctcaacgtggccgatgtgctggagctcaccgtggccgag gcggccctgctgttcgcccaggaccgcgaggtcatccgcgccctgcagcccatcgtcgat gtgggcctggaatacgtgaagctgggccagcccgtgcccacgctgtcgggcggcgaggcc cagcgcctcaagctcgcgggctttctggccgaggcggccaagtcccaggccaagtcgaag caggcgctggccaagaagggcacattgttcctgttcgacgagcccaccacgggcctgcac ttcgacgacatcgccaagctcatgcgcgcgctgcgcaagctgctggaggccgggcactcg ctgatcgtcatcgagcacaacctcgacgtgatccgcgccagcgactggctgatcgacctc ggccccgaaggcggcgacggcggcggcggcatcgtggcccagggcacgcccgaggaagtg cgccagattcccggctcgcacacggcccaggcgctgcgcgagtacgacctggccatgggc gtgggcggcgaggccgtgcgcgaggtcgcccccatgctctacaagagccagcgcaaggcg catgccatgtcgggcgccgcggccaggaatgccatcgagatcgtcaacgccaaggagcac aacctcaagcagctgtcggtggagatcccgcgcggcaagttcaacgtggtgacgggcgtc tcgggctcgggcaagtccacgctggccttcgacatcctgttcaacgaaggccagcgccgc tacctggagtcgctcaacgcctatgcgcgctccatcgtccagcctgcgggccggcccgag gtggatgcggtctacggcattccgcccaccgtggccatcgagcagcgcctgtcgcgcggc gggcgcaagtccaccgtgggcacgaccaccgaggtctggcacttcctgcgcctgctctac gtcaagctgggcacgcagcactgcatccacgacggcgccgccgtgcagccgcagacggcg gaaagcatcgcggcccaattgctcacgcagttcaggggccagaccatcggcctgctggcg ccgctggtggtcaaccgcaagggcgtttacaccgagctggccgactgggcgcgcccgcgc ggctacacgcatctgcgcgtggacggcgaattcctgcccaccacgggattcccgcgcatc gaccgcttcaaggagcacaccatcgaactgcccgtggccagcgtcaccgtcacggcggcc aacgagcgcgaactgcgcggccacctggcgcaggcgctggaaacaggcaagggtgtgctg catgtgctgtcaggcctggacaacctggccgatgccatggccggcggccggagcacggcc ggcatcggcagcctgcaggtgttctccacccagcgcgcctgcccggtctgcgccaccagc tatgccgagctggacccgcgcctgttttcctacaacagcaagcacggctggtgccccgac tgcgtgggcacgggcgtcaagctcaccaaggaccagcgcaaggtctatgacgacaccctg ctggtcgaggacaaccggggtcgcgaggtcaagttcgaaggccaggaaatcgaagacctg gccgaagtgacctgccccacctgccagggcacacgcctgaacgccacggcgcgcgccgtg cgcttccatggcgtgggcattgccgagatcgcccagctgtcggtcaacgacgtgcggcaa tgggtgcaggcgctggccctgtccggacgcgagtccgacattgcgcgcgacctcatcccc gagatccagagccgcctcgaattcctggaggaagtgggcctgggctacctgacgctggac cgtggtgcgcccacgctgtcgggcggcgaggcccagcgcatccgcctggccgcgcaactg ggcagcaacctgcagggcgtgtgctatgtgctggacgagcccaccatcggcctgcatgcg cgcgacaaccagatcctgctcaacgccctgcacaagctgggcgacaagggcaacaccctg gtcgtggtcgagcatgacgaagacaccatccgccgcgccgaccacatcatcgacatcggc cccagcgccggcatacgcggcggccgcctcgtggcccagggcacggcggccgacatcatg gcggccgaggactccatcacgggccgctacctgctgcacgccatgcgccacccgttccag ccgcgccgctgggtgggcgaaggccagccgccgcaggcggccgccgagcttgccgccgtg gccgaaccggtgccggaacccgcgcctgtcaaggtatccaaatccaaaaagaaggccgcg cctgtcgttgtcgaagccgagcccgcctccgacgcactgagctggctgaccgtgcgcggc gcccacttgcacaacctgcagaacgtggatgcgcgcgtgccgctcaagcgtctggtggcc gtcacgggcgtcagcggctcgggcaagtccacgctggcgcgcgacgtgatgctggccaat gtggccgcctgggtgggccagcgcgccaccaaggctgggcgcgatgccatggacgcgggc aaggcgccgccgctgtccggctgcaagggcctgcagggcttcgagggcattgaccgcgtg ctcgaggtcgaccagacccccatcggcaagaccccgcgcagctgcccggccacctacatc ggcttctgggacaccatccgcaagctctatgccgaaacgctggaggccaaggcccgcggc tacgcggccggccgtttctcgttcaacaccggcgaaggccgctgcccggcctgcgagggc cagggcatgcgcaccatcgagatgagcttcctgcccgacgtcaaggtgccctgcgaggtc tgccatggcgcgcgcttcaaccccgagaccctggccgtctcctggcgcggcaagagcatt ggcgacgtgctgcagatggaggtggacgaggccgtcgagttcttcgccagcatgcccagt atcgcccacccgctgcagctgctcaaggacgtgggcctgggctatctcacgctgggccag ccctcgcccacgctgtcgggcggcgaagcccagcgcatcaagctcgtcaccgagctgacc aaggtgcgcgacgacgtgacccggcgcggcaacaaggcgccgcacacgctctatgtgctg gacgaacccacggtgggcctgcacatggccgatgtggacaagctcatccgcgtgctgcac cgcctggtggatgcgggccatagcgtggtcgtcatcgagcatgacctggacgtgatcgcc gaggccgactggatcatcgacctcggccccgaaggcggaaaggacggcggccgcatcatc gcggccggcacgcccgaggatctggtggctgcgggcacgcacacgggcaaggcgctcaag cccgtgctggcccgttga

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