Maridesulfovibrio hydrothermalis: DESAM_22367
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Entry
DESAM_22367 CDS
T02428
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dhy
Maridesulfovibrio hydrothermalis
Pathway
dhy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dhy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DESAM_22367 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dhy02000
]
DESAM_22367 (msbA)
Enzymes [BR:
dhy01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
DESAM_22367 (msbA)
Transporters [BR:
dhy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DESAM_22367 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
DEAD
ABC_ATPase
AAA_29
AAA_30
AAA_24
AAA
DUF87
RsgA_GTPase
AAA_5
DUF3584
nSTAND1
T2SSE
AAA_21
AAA_23
AAA_28
ATP-synt_ab
NB-ARC
MMR_HSR1
NACHT
cobW
AAA_18
AAA_25
Motif
Other DBs
NCBI-ProteinID:
CCO24634
UniProt:
L0RCZ9
LinkDB
All DBs
Position
complement(2773228..2774991)
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AA seq
587 aa
AA seq
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MPKGEKYNYLKNKHLVRRCFTYFLPYKFKIFISFISMGVVAAATGATAYLIQPAMDDIFI
NKDQEALMIVPIVFVVVMLVKGLFRFIQTYLMNTTGLLVLERLRNDLFGKIICLPMNFFE
ESQVGMLMSRILNDVTEIRQSLPSFIMMIREVFTIICLIGLVFYRDPYLASFAVLVLPLA
IFPFFYFGRKLRKLGRKNQVKISDINAQLQEAFSGVKVIKAFSNEKREADKFEGENHRLV
HIAIKQVLHGELSSRVMEVVGALGIGLVLWYGGAQVIQGNSTPGTFFSFIAALIMLYEPI
KKINSANLTIQRAFAGAERVFEILDSPDIVVEKGGDVELDQSFKKLEIKDLTFSYPSSEY
PVLDNINLDVKAGQKVAIVGPSGSGKTTLVNLIPRFYDCQQGKIILNGKPVEDYSLKSLR
LNIGMVSQETFLFNATVRENISYVSQNAPMETVIESAQTAFAHEFIEKLPEGYDTVVGER
GVRLSGGQKQRLTIARALLKNPPLLILDEATSALDTEAERIVQMALENLMEDRTSIVIAH
RLSTVLSADVIVVMEKGKIVAKGRHKELLETSPLYLKLYNMQFQDNR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaaaggcgaaaaatataattacttgaaaaataaacaccttgtcagaagatgtttc
acctatttccttccatataaatttaagatttttatatcttttatatctatgggcgtggtt
gctgctgcaacgggcgcgacggcttatcttatccagcctgctatggatgatatttttatc
aataaagatcaggaagctttgatgatagttcccatcgtttttgtggtggtgatgctggtc
aaaggccttttcaggtttattcaaacctatttgatgaatactaccggactgcttgttctt
gaacggcttagaaatgatttgtttggaaagattatctgcctgcccatgaatttctttgaa
gaaagtcaagtcggcatgctcatgtcaagaattctcaatgatgttactgagatcaggcag
agtctaccttcgtttatcatgatgatccgcgaagtatttactataatctgtctgatcggg
cttgttttttatcgtgatccctatcttgcatcttttgctgtgctggttttaccgctggca
attttccctttcttctatttcgggagaaagctgcgcaaacttggccgtaaaaatcaggtc
aaaatttcggatattaatgcccagcttcaagaagcgttcagcggagttaaggtaattaaa
gctttttcaaatgagaaacgtgaagctgataaatttgaaggtgaaaatcaccgtttagtt
catattgccattaagcaggttctgcatggcgaactttcctccagagtgatggaagttgtc
ggtgctttaggcatcggccttgttctttggtacggcggggcgcaggttattcaaggaaat
tctactccgggtacatttttctcgtttatcgcagctcttattatgctttatgagcctata
aaaaaaatcaacagtgccaacctgactattcaacgcgcatttgccggagctgagagagtt
ttcgaaattctcgattctcctgatattgtggttgaaaaaggcggagatgttgaactggat
cagtcttttaaaaagcttgagattaaagatcttacatttagctatccttcgtcagagtat
cctgttcttgataacatcaatctggacgttaaggccggacagaaggttgctattgtcggg
ccgagcggctctggcaagactacccttgtgaaccttattccccgtttttatgattgccag
cagggtaaaattattttgaatggaaagcctgtcgaggactattctcttaagtctttgcgt
ttaaatataggtatggtttctcaggagacttttctttttaatgccactgtccgtgagaac
atttcatatgtgagtcagaacgctccgatggaaactgttatagaatctgcgcagacagca
tttgcacatgagtttattgaaaaactgcctgaaggttatgacacggttgtaggtgaaaga
ggtgtgaggctttcaggtggacagaaacaacgtttgaccattgcccgggcgcttcttaaa
aatccgccgctcttaattcttgacgaagcgaccagcgcgcttgatactgaagctgagcgc
attgttcagatggcacttgaaaatctcatggaggacagaaccagcatagttattgctcac
aggctttcaaccgtgctttctgccgatgtgattgtcgtaatggaaaaaggtaagattgtc
gctaagggcagacataaggagctgctcgaaacttcacctttgtaccttaaactttacaac
atgcaatttcaggataaccgctag
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