Delphinapterus leucas (beluga whale): 111167578
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Entry
111167578 CDS
T05885
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
dle
Delphinapterus leucas (beluga whale)
Pathway
dle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111167578 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dle03019
]
111167578 (PNLDC1)
Enzymes [BR:
dle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111167578 (PNLDC1)
Messenger RNA biogenesis [BR:
dle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111167578 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
111167578
NCBI-ProteinID:
XP_022416263
UniProt:
A0A2Y9MG64
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MAKLGRSADLENRQDAVPLSLHRSCRIAKKLLRSKVAGVALRRSEAPGAGGGVLRSGFPR
REPFKTAARRKRVAARGRTGRPQPSCVAMDVGADEFEQSLPLLQELVLGADFVGKAPGFR
ASSPQPPGRREGVVRAAQGGEGVCLFGPGGDVRQQLLGSSLGPSLVQVERGGLACPCFGF
LCSPFLTSPGLLSSKKVSQNFYHQQRLQHKEPCDGLRLGTLVFLASPTGLDIEFTGLRSN
PSGPQQISLFDLPSEWYLKTRQSVQQFTICQIGLSMFSSIEGESNKYEAHSCNFFLFPTT
FGILDSEFSFQASSVQFLNEHGFDYNKFLKNGIPYMNEEQEKKIKHSILTGNWRVRSSLD
KDQIKVVIDEVTRWLDLAEEGDWMTLPGITGFQAFEVQLVLRKALPDIWTVMRDQGVTVK
KVSKRHRWYLENTSCDRESCWQEKILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHE
KFFRPLPESYDEFKLNIHNLFPVLIDTKSVAKDIWKELNFPRVSNLLEVYEVLNSDLNPT
KNSGPVIIHASKCEKYVETKYPHEAAYDAFLCGSVLLKVAHLLLWRVHGVLPIPEPSFPL
YLDVLAPYVNQVNLIRAGVPKINFSGPDHPSIRPPILIVTVKRWPGVSEQQVYREFQNLC
KFDVRRLVGSHFLLLTNKFKDTRSILKEYRCHPTLQVSLYRYWRHSPNVSCLLQVCGVVT
TWAFIAFLLGRARP
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggccaagttgggaagaagtgcggatttggaaaaccgacaagatgcggtccccctatcc
ctgcaccgtagctgcaggattgcgaagaaattgctgcggagcaaggtggccggcgtcgcc
ctccgccggtcagaggcccccggggctggtggcggtgtgctgcgtagcgggtttccccgc
cgcgagccctttaagacggcggcgcggcggaagcgcgtggcagcacgtggccgcactggg
cgccctcagccgagctgcgtggccatggacgtgggcgccgatgagttcgagcagagcctc
cctctgttgcaggagctcgtcctgggcgcggacttcgtgggtaaggcgccgggattccgg
gcctcatcgccgcagccccctggccggcgggagggtgtggttcgggcggcgcagggcgga
gagggtgtgtgccttttcgggcctgggggggatgttaggcagcagttacttggcagcagc
cttggccccagtttggtccaggtagaacggggtggcctggcttgtccttgctttggcttc
ctctgttctcccttcttgacctctcctggcctcttgagcagcaagaaggtgagccagaac
ttttaccaccagcagcgtttacagcacaaagagccttgcgatggcctgcgcctggggact
cttgtctttcttgcctcccctacaggtctagacatagagttcactggtcttcgttctaac
ccgtccgggccccagcagatcagtctgtttgacttgccatcagagtggtatctaaagacc
cgtcagagtgttcagcagttcaccatctgtcagattggattgtctatgttttccagtatt
gaaggcgagtcaaacaagtatgaagcccattcgtgtaacttctttctcttccctacaaca
tttgggattttggattcagaattctctttccaggcttctagtgttcagtttttgaatgag
catggcttcgattataacaagtttctcaagaatggaatcccatatatgaacgaagaacag
gagaagaaaattaaacacagcatcctgactgggaactggagagttcgcagttctctggat
aaagaccaaatcaaggtggtgattgacgaggtgacgcgctggctggacctggcagaggaa
ggcgactggatgaccctccctggtatcaccggcttccaggccttcgaggtccagcttgtg
ctgaggaaggccctccccgacatctggacggtgatgagagaccagggggtgacagtgaag
aaagtgagtaaacggcatcgctggtatcttgagaacacctcttgcgatcgagagagctgt
tggcaggagaagattcttctttctgcgaggggtttttctgtgtttttccagatgctggtg
aaagcccagaagcccttagtgggacataatatgatgatggatctgctgcatctccatgag
aagttcttcagacctctcccagaaagctatgatgaatttaagctgaatatccacaaccta
tttcctgttctcattgacaccaaaagtgtggcaaaggatatctggaaggaactgaatttc
ccaagggtttcaaatcttttagaagtttatgaagtcctaaacagtgacttgaatcccacc
aagaattctgggccagtgattattcacgcaagcaaatgtgaaaaatacgttgagacaaag
tatccccacgaagcagcgtacgatgccttcctgtgcggatcagttcttttgaaggtggcc
cacttgctcctgtggagagtgcacggggttcttcccatccccgagccctccttcccgctg
tacctcgatgtgctggctccctatgtgaaccaggtgaatcttatccgagccggggtcccc
aagatcaatttttcgggtccagatcaccccagtatccgccctcccatcctcattgtcacc
gtcaagaggtggcccggggtcagcgagcagcaagtctaccgcgagtttcagaacctctgc
aagtttgatgtcaggagactggtggggagccacttcctgcttctgaccaataagtttaag
gacacccggagcatcctgaaggagtacaggtgccaccccaccctgcaggtctccctgtac
cgctactggagacactccccgaacgtcagctgcctgttacaggtctgtggcgtagtcacc
acctgggcctttatcgcgtttctcctgggaagagctcgcccctga
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