Solidesulfovibrio magneticus: DMR_37530
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Entry
DMR_37530 CDS
T00917
Symbol
nfo
Name
(GenBank) putative endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
dma
Solidesulfovibrio magneticus
Pathway
dma03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DMR_37530 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dma03400
]
DMR_37530 (nfo)
Enzymes [BR:
dma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
DMR_37530 (nfo)
DNA repair and recombination proteins [BR:
dma03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DMR_37530 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BAH77244
NITE:
DMR_37530
UniProt:
C4XMB6
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All DBs
Position
4244998..4245816
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AA seq
272 aa
AA seq
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MNTMLFGISGLPHGDGKTKFAYATAIPHLRGLGLDAMELPFVRSVNVTAKNQAAILRAKA
ENDFHLTAHASYFINLNAAEPDKLEASLARIRQGAEALALVGGRDLVFHPGYYLGQPPQA
VLQTIGENLRRLPDTGVRYRLETTGKATQFGTVAELAGLCREVPTCKPCLDFSHIHARDN
GALKTRADFSRVLRQLADILGEAALGELHIHISGIEYGPKGEKRHLPLAQSDFDYTACLA
ALRDHGAAGCVICESPVLEHDAMLLKKTWLAL
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaccatgcttttcggcatctccggcctgcctcacggcgacggcaaaaccaaattc
gcctacgccacggccatcccccatttgcggggcctaggcctggacgccatggaactgccc
tttgtgcgctcggtcaacgtcacggccaaaaatcaagcggccatcttgcgggccaaggcg
gaaaacgatttccacctcacggcccacgcctcgtatttcattaacctcaacgccgccgaa
ccggacaagctggaagcctccctggcccgcatccgccagggagccgaagcgcttgccctg
gtcggcggacgcgatctggtcttccaccccggctactacctcggccagccgccgcaggcc
gtgctccagaccatcggcgaaaatctgcgccgcctgccggacacgggcgtgcgctaccgc
ctggagaccacgggcaaggccacccagttcgggaccgtggccgaactggccggcctgtgc
cgggaggttccgacctgcaagccgtgcctggatttttcccacatccacgcccgggacaac
ggcgcactcaagacccgggccgatttcagccgggtgctgcgccaactggccgacatcctg
ggcgaggcggcccttggcgaactgcatatccatatcagcggcatcgaatacggccccaag
ggcgaaaagcgccacctgccgctggcccaaagcgacttcgattatacggcctgcctggcg
gcgctgcgggaccacggcgcggccggctgcgtcatctgcgagtcgccggtgctggagcac
gacgccatgctgctcaaaaagacctggctcgccctgtag
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