Dehalococcoides mccartyi GY50: GY50_0056
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Entry
GY50_0056 CDS
T02938
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
dmg
Dehalococcoides mccartyi GY50
Brite
KEGG Orthology (KO) [BR:
dmg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dmg03110
]
GY50_0056 (clpC)
Chaperones and folding catalysts [BR:
dmg03110
]
Heat shock proteins
HSP100
GY50_0056 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
TniB
AAA_14
AAA_18
IstB_IS21
ATPase_2
nSTAND3
AAA_28
Mg_chelatase
Roc
RsgA_GTPase
NACHT
bpMoxR
RuvB_N
Kbp-5
Motif
Other DBs
NCBI-ProteinID:
AHB12842
LinkDB
All DBs
Position
50367..52841
Genome browser
AA seq
824 aa
AA seq
DB search
MSSRFDKFSERARRVLTYAQEEAQSLNHNYIGTEHILLGLVREEEGVAARVLVNMEVNLA
KVRSAVEFILGRGEHPATSETGLTSRAKKVIELGIDEARNLGHNYIGTEHLLLGLLREGE
GAAAGVLESFGVTVEKVRTEVGRILNQGLNKPKTSRTTPSRTPQLDQLGFDLTAAARTGK
LDPVIGRAKEIERVVQILSRRTKNNPALIGEPGVGKTSIVEGLAQRIVSGDVPETLEQKH
IISLDVASLVAGTKYRGEFEERLKKVIEEIKTAGNIILFIDEFHTMVGAGAAEGAVDAAN
ILKPSLARGEVQVIGATTLDDFRKYVERDAALERRFQPVLVEEPAIEDTLNILRGIKERY
EEHHKLIISEEAIAAAANMAARYIPDRFLPDKAIDLVDEAASRVRIKKRTKPVSLKEMKA
IEDSYRRDKEAALATQQYDYASELRERELQIAEKIRRMEDEWQNEQAMDKPVVGEEDIAQ
VVSMWTGVPLVQLTGDETERLLHMEEALHERIIGQEEAIVTISKAVRRARAGLKDPRHPI
GNFVFLGPTGVGKTELARALAQFMFGSEDALVRLDMSEFMEKFAVSRLVGAPPGYVGYDE
GGQLTEAVRRKSYCLILLDEIEKAHPDVFNILLQIFDDGHLTDAKGRRVDFRNTIIIMTS
NIGAELIRKGSGTIGFATQTDESKAQQTNFEHMKDKLLGELKKSFRPEFLNRIDSVVVFH
SLNKEQIRSIVDLMLKSVIKQMSEKGIGLEVTESAKDLLGKKGYDEVYGARPLRRTIQTM
IEDRLSEDLLRAKFKAGDKVIVDTAEDEIIVRLAEPAELSQATS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtagatttgataaattttctgaaagagcgcgccgggttcttacctatgcacag
gaagaggcccagagccttaaccataactatatcggtaccgagcatattctgctggggctg
gtaagggaagaagaaggcgtggctgctcgagtactggtcaacatggaagtaaatttggcc
aaagtacgttctgccgttgaatttatacttgggcggggcgaacacccggctacctctgaa
accggtcttacctccagagccaaaaaggtaatagaactgggtattgatgaagccagaaac
ttggggcacaactatatcggcactgagcacctgcttttaggtttactgcgcgaaggcgaa
ggagcagctgccggtgtgcttgagagtttcggggttactgttgaaaaggtacgcaccgaa
gtggggcgtattttaaatcagggcttaaataaacctaaaaccagccgtacaactcccagc
cggaccccccagcttgaccagctgggctttgaccttacggctgctgccagaaccggcaag
cttgacccggttatcggtcgtgccaaagaaatagagcgggtcgttcagattctttcccgc
cgtaccaaaaataaccccgcacttatcggcgaacccggtgtcggcaaaacctccattgta
gaggggcttgcccagcggattgtttcgggtgacgtgccggaaactctggaacaaaaacat
ataatttctctggacgtggcctcactggtagccggtactaaataccggggtgaatttgag
gaacggctcaagaaagttattgaagagattaaaaccgcaggcaatataatcctgtttata
gacgaatttcataccatggtgggtgccggtgccgccgagggtgcggtagatgccgctaat
atcctcaagccttcgctggccagaggtgaggtacaggtaataggggcaaccactctggat
gacttccgcaagtatgttgaacgggatgccgcacttgagcggcgtttccagccggtgctg
gtggaagaaccggccatagaagataccctgaatattcttcgcggcataaaagagcgctac
gaagagcatcataagcttatcatcagcgaagaagctattgccgctgccgccaatatggct
gccagatatatacctgaccgctttttgccggacaaggctatagatttggttgacgaagct
gcttcacgggtgcggataaagaagcgcaccaagccggtctctctgaaagagatgaaagcc
atagaagacagctaccgccgggataaagaagccgctttggctacccagcagtatgactat
gcctccgaattgcgtgagcgggagcttcagatagctgaaaagatacgccgcatggaagac
gagtggcagaacgaacaggctatggacaagccggtagtgggcgaagaagatattgcccag
gtggtcagcatgtggacgggtgttccgctggtacagcttaccggtgacgaaaccgaacgt
cttttacatatggaagaagccctgcatgagcggattatcggccaggaagaagctattgtt
accatatccaaggctgtcaggcgggcacgggccggtcttaaagacccccgccaccccatc
ggcaactttgttttcctcgggcctaccggcgtgggtaaaaccgagctggcacgggcgctt
gcccagtttatgtttggttcggaagatgctttggttcggctggatatgtccgaatttatg
gaaaaatttgccgtatcccgtctggtgggtgcacctcccggatatgtgggttatgatgag
ggcggtcagctgactgaagccgttcgccgcaagtcgtactgcctgatactgttggacgaa
atagaaaaagctcatcctgatgttttcaacatacttctgcagatatttgatgacggccac
ctgacagatgccaagggcagaagggtggattttcggaataccattattatcatgacctca
aacattggggctgagcttatccgcaagggcagcgggactatcggttttgctacccagaca
gatgaatcaaaggctcagcaaactaactttgagcatatgaaagacaagctgctgggtgag
ctcaagaagagtttccgtccggaattcttgaaccgcattgacagcgtggtggttttccac
tcgctgaacaaagagcagattcgcagcattgttgacctgatgcttaagagtgttatcaag
cagatgtctgaaaagggtatcgggcttgaagtgactgaatctgccaaagacctgctgggt
aagaaaggttatgatgaggtttatggtgcaaggccgctgcgccgcactatacaaaccatg
atagaagatcgtctgtccgaggaccttctgcgggctaaatttaaagctggggataaagtg
atagtggatactgctgaagatgaaataattgtccgtctggcagagccggctgagcttagt
caggctacttcgtaa
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