Desulfonema magnum: dnm_001050
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Entry
dnm_001050 CDS
T07102
Name
(GenBank) Sigma-54 interaction domain-containing protein, PAS domain-containing
Organism
dmm
Desulfonema magnum
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PAS_9
Sigma54_activ_2
PAS
PAS_8
HTH_8
PAS_4
AAA_5
AAA_2
HTH_50
AAA
PAS_3
PAS_10
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
QTA84112
UniProt:
A0A975BEM0
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Position
80898..82616
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AA seq
572 aa
AA seq
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MDDVFIKYSHIGEIFDYLSLGVIILSPDRKITSMNRTAEVLTGYKESEVIGIYCYRIFLD
YLCGGSCKFLEAEETERKNVVSDIWTADQINEHLTITKIEAPIYGVNKELVGCIEVFQDY
SAFKDLIKRIRYDDIRLKIILDNLDIGVLTLDRGNHISFFNTTAEKITGFSRSEVLGKPC
HTVLGEDFCKDILALQQSMNKGNFHSSMEGKIVVRGGHAIPVRANYITLKNEEGGIVGGL
ATISDLSLKYQFDRAFKDRYTFGDMVGKAPVMQRIFEIIPIVAPTESTILIEGPTGTGKD
LLTKVIHNSSTRHKKPLVKVNCAALPDNLLESEMFGYVKGAFTGANRDKPGRFQDADGGT
IFLDEIGDLPLSLQAKLLRVLEDREFYPLGSRKTTKVDVRIISATNQRLEKLVQERRFRE
DLFYRLNVMRLELPALKERRSDIPFLISHILNRLCAARDTQIDKISEAAMEVLLNYDYPG
NIRELENILEHALIICQGSVIERKHFPVSLLKAVDTITEERKPLAEKLGHEEKEKILSML
KKYEWKRSLTARALNINRSTLWRKMKKYDILC
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtttttataaaatacagtcatattggtgagatttttgattatctgtcactg
ggcgttatcattttgtctccggatcgcaagatcacgtccatgaacaggactgccgaagtg
ctgacagggtataaggaatcagaagttatcggaatatattgctataggatatttcttgat
tacctgtgcggcggttcctgtaaatttcttgaagctgaagaaacagagcggaaaaatgtg
gtttctgatatttggaccgcagaccagatcaatgaacatctgacaattacaaaaatagaa
gctccaatatacggcgtaaataaagaacttgtgggctgtattgaagttttccaggattat
tcggcattcaaagacctgatcaaacggatacggtatgatgatatcagactgaaaatcata
ctggataatcttgatatcggagtccttacgcttgaccgcggcaatcacatatcctttttt
aacaccacggctgaaaaaattaccggtttcagccggtcggaagtgcttggcaaaccttgc
cacacagttctcggagaagatttttgtaaagatattttagccttgcaacaatcaatgaac
aaaggaaattttcattcaagtatggaaggaaaaattgttgtgcggggggggcatgccatt
ccggttcgggcaaactatatcacgcttaaaaacgaagaagggggcattgtgggcggcctg
gcaactatttccgatctctccctgaaatatcagtttgaccgggcttttaaagaccgatat
acttttggtgacatggtgggaaaagcgcctgtcatgcaaagaattttcgagatcatcccg
attgtcgctcctacggaatcaaccatactgatagaagggccgaccggaacaggcaaagac
cttctcaccaaggttattcataacagcagcacgcggcataagaagcctctggtaaaagtg
aattgcgcggccttgccggacaatcttcttgaatcggaaatgttcggatatgtcaaaggt
gcgttcacaggcgcgaacagggacaagccggggcgattccaggacgcggacggcggaaca
atctttcttgatgagatcggtgatcttcctttgtcattgcaggcaaaacttcttcgggtc
ctggaagacagagagttttaccccctgggaagcagaaaaaccacaaaagtggatgtccgc
atcatttcagccaccaaccagcgtcttgaaaaactggttcaggaaaggcgttttcgggag
gacttgttttatcgtctcaacgtcatgcgtctggaacttccggctttgaaagaacgcaga
agtgatattccgtttctgatttcccatatccttaaccggctttgtgcggccagagacaca
cagatagataagatatccgaagcggccatggaagtgcttttgaattacgattatccggga
aacatcagagaattggaaaatattcttgaacatgccctgatcatctgtcagggttccgtg
attgaacgaaaacattttcccgtatcccttttaaaagctgttgacaccattactgaagaa
agaaagccactggctgagaaactcggacacgaggaaaaagagaaaattctttctatgttg
aaaaaatatgaatggaaaagaagtctgaccgcccgggcattaaacattaatcgcagcacc
ttatggcgtaagatgaagaaatatgatatattgtgctaa
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