Desulfurococcus mucosus: Desmu_0388
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Entry
Desmu_0388 CDS
T01406
Name
(GenBank) Wyosine base formation domain-containing protein
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
dmu
Desulfurococcus mucosus
Brite
KEGG Orthology (KO) [BR:
dmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dmu03016
]
Desmu_0388
Enzymes [BR:
dmu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
Desmu_0388
Transfer RNA biogenesis [BR:
dmu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
Desmu_0388
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wyosine_form
Radical_SAM
Hydrolase
HAD
Motif
Other DBs
NCBI-ProteinID:
ADV64707
UniProt:
E8R881
LinkDB
All DBs
Position
378686..379774
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AA seq
362 aa
AA seq
DB search
MSIEWSEVKRRREEFWNSSPVYRAIYDRLVKQGYHLIGTIGAVKRCHWSKEAVLRNRYCY
KCLWYGIESHRCIQMTPVAAWCWNRCLHCWRLQPEDIGMHWDDTRPPVVDDPEVLVEESI
RVHREIMAGFKGNPRADQRLVEEALNPKHAAISLTGEPLLYPRLGELIEEYHRRGITTFL
VTHGTRPDVLGSLEVEPSQLYISIEAWDKDSYEHFNRPLVPRAWELFNETLGLIPSFKSP
TVFRFTIVKGFNDHDVALRSFAGFVEKAQPSYIEVKAYMHIGGSRGRLFKNNMPSHGEVR
NVAARLAELTGYQVLSESIPSRIVLLSRVGKPLRHGKGCPDGVEHPEKYAPPLTEEYEEL
QD
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
ttgagcatagagtggagtgaggtcaagaggaggagggaggagttctggaacagtagccca
gtgtacagggctatatatgataggctggttaaacaaggctaccacttgataggcaccata
ggggctgtgaagagatgccactggagtaaggaggcggttttaaggaacaggtactgctac
aagtgcctctggtacggtatcgagagccataggtgtatacagatgacgcctgtggccgca
tggtgctggaacaggtgtctccactgctggagactgcagcccgaggacataggcatgcac
tgggatgacacgcgtccaccagtggtcgacgacccggaggtcctcgtcgaggagagcata
agggttcacagggagataatggctgggttcaagggtaacccgagggctgaccagaggctc
gtggaggaggccttgaaccctaagcatgcagcgataagcctgacgggtgaacccctcctc
tacccgaggctaggggagctgatagaggagtaccataggagagggatcaccacgttcctc
gtcactcacgggacgaggccggatgtgcttggaagcctcgaagtagagcccagccagctc
tacattagcatagaggcatgggacaaggacagctacgagcacttcaaccgcccccttgta
cccagggcatgggagctcttcaacgagacccttggcctcatccccagcttcaagtccccc
acggtcttcaggttcacgatagtcaagggcttcaacgaccacgacgtggctctcaggagc
ttcgcagggttcgttgagaaggctcagccatcctacatagaggtgaaggcgtatatgcat
ataggtgggagcaggggcaggttgttcaagaacaatatgccgagccacggggaggtgagg
aatgtggctgcgagactagccgagctcacaggctaccaggtgctcagtgaatccataccg
agccgcatagtgttgttgagcagggttggtaaacccttgaggcatgggaaagggtgtcca
gacggcgtcgagcacccggagaagtatgcgcccccattaaccgaggagtacgaggagctc
caggactag
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