Dichelobacter nodosus: DNO_0129
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Entry
DNO_0129 CDS
T00517
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase C, S13 family
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
dno
Dichelobacter nodosus
Pathway
dno00550
Peptidoglycan biosynthesis
dno01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dno00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DNO_0129 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
dno01002
]
DNO_0129 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dno01011
]
DNO_0129 (dacB)
Enzymes [BR:
dno01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DNO_0129 (dacB)
Peptidases and inhibitors [BR:
dno01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
DNO_0129 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
dno01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
DNO_0129 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ABQ13840
UniProt:
A5EWP7
LinkDB
All DBs
Position
complement(132631..134013)
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AA seq
460 aa
AA seq
DB search
MLTFPAIAQQIPVAIVDLLNKHHLAQEDVSVVVQNVRNTVPLVNLNDTTLRAPASTAKLL
TTAAGLIRMSADYRWQTEFYLDKLPDANGVSQGNLYIKGGGDPFLVEEQLTQMLQALRDQ
GLRHITGNIVLDMSLYQLPPEERDAAAFDGHPLSAYNAIPNPLMVNFRTIKVQIVPQGDR
AVRLLLSPNIANWTIENQLTISNKSCQKNYAPNVALIREENGFARLQVSGAYSTACGACE
LTLALGEASEQFYYLFYQIWHQLGGSFDGSGTIATVPKTAKIYYTGLSLPLAEQIQKMNQ
LSNNVMTRQLMLTLGAFAYGQPANLESGRRAVLETLRQFGVPLEHAIIDNGSGLSRQTRV
SAGDLATLLFKMYHSEYADTFISSLAVAGHSGTLKKRFRGEKLAGRIYGKTGTIDEVRSF
AGYLLAENGNTYIVVIITNGKTAAAGRPFQDDVFRWVDTQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtttccggcgatagcgcaacaaattcctgtggcaatcgttgatttgctcaat
aaacaccatctggcgcaagaagatgtgagcgttgtcgtgcaaaatgttcgtaatacagtg
ccgttggtcaatcttaacgatacgacgctgcgcgcgccggcatctactgccaagttatta
accaccgccgctggactgattcgtatgagtgcggattatcgttggcaaaccgaattttat
ttagacaaattgcctgatgccaatggcgtcagtcaaggcaatttatacattaaaggcggc
ggtgatccgtttttggtggaagaacaattaacgcaaatgctgcaagctttgcgcgatcaa
ggtttgcgccatattacgggcaacatcgtgctggatatgtcactttatcaattgccgcca
gaagagcgcgatgctgcggcttttgatggtcacccattatcggcgtataacgccattccc
aatccattaatggtgaattttcgaacgattaaagtgcaaattgtgccacagggagaccgt
gccgtgcgtttgctgttatcgccgaatatcgcgaattggacgattgaaaaccagctcacg
atttctaataaatcctgccaaaaaaattacgcacccaatgttgcgctcattagagaagaa
aacggtttcgcgcggttacaagtcagcggcgcttattccaccgcctgcggcgcttgtgaa
ttgacgttagcgctcggcgaggcaagcgaacagttttattatttgttttatcaaatttgg
catcaattgggcggcagttttgatggcagcggcaccatcgcaaccgttcccaaaacggca
aaaatttattacaccggtttatctttaccgcttgccgaacaaattcaaaaaatgaatcaa
ttgagtaataacgtaatgacgcggcaattgatgctcacgctgggcgcttttgcttacggt
caaccggcaaatttagaatccggacggcgcgccgttttagaaaccttacgacaattcggc
gtaccactcgagcatgccattatcgataacggttcggggctttcgcggcaaacgcgcgtc
agcgccggcgatttagcgactttattattcaaaatgtatcattccgaatatgccgatacg
tttatcagctcgctggcggtagcaggacattccggaactttgaaaaaacgctttcgcggt
gaaaaattagccgggcgcatttacggaaaaacgggcacaatcgacgaagtgcgctctttt
gccggttatcttttagcagaaaatgggaatacttatatcgtcgttatcatcacgaacggc
aaaaccgctgccgccggtcgcccgtttcaagacgatgtattccgttgggtggatacgcaa
tga
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