Diuraphis noxia (Russian wheat aphid): 107163266
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Entry
107163266 CDS
T04900
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107163266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnx03041
]
107163266
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107163266
Spliceosome [BR:
dnx03041
]
Complex C
Other components
Step II factors
107163266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_19
AAA_22
nSTAND3
T2SSE
Flavi_DEAD
PhoH
AAA_7
TssR_VWA
AAA_16
AAA_30
Microtub_bd
AAA_14
Motif
Other DBs
NCBI-GeneID:
107163266
NCBI-ProteinID:
XP_015366080
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MSDDEDGVHKLSGYNHTEGGLIIKKKPKPAEQFEFKIPDVPRGSLLGLDKLAAQKRLERE
LEKTKKSTLHSYTDNDDEGQDVEETNLENDLKHKNKSRHYRSAHEETPTYTGGLSKQAIE
KQERLKKSYNRGVHYSTSDSKDKRNRHRDRRSSDKSDKRNRRNEPYYKKHERSGNRDYRS
SRTPSIRSKDEPLTPNVRLRDTPSRTTWDEDDHNMSSYKSSTWDMPTPKSSIDDDPTRTP
RFTPAYKYNKWDSHRASGATPKPGKENDLLWASESDRDEWEEAQNRLDRQWYNLDEGVDE
TNNPFSDVSESYAKKKEQQLAQSKKKRMSAQQRQINKDNELWERNRMLTSGVVVSVDIDE
DFDEDNEARVHLLVHNIVPPFLDGRIVFTKQPEPVIPVKDPTSDIAIVARKGSMLVRTFR
EQKERKRAQKKHWEVAGTAIGNIMGVKKKEDDKDERIDEEGETDYKTDQQFAEHIKNTPE
ASSDFARKKTYAQQRQYLPVFAARQELLNIIRENNIVIVIGETGSGKTTQLTQYLHEEGY
SKFGMIGCTQPRRVAAMSVAKRVSDEMNTKLGDEVGYAIRFEDCTSEKTVIKYMTDGILL
RESLRDPDLDNYSAVIMDEAHERSLNTDVLFGLLREVVTRRTDLKLIVTSATMDASKFSL
FFGNVPTFNIAGRTFPVEVMFSKNPCEDYVEAAVKQALQIHLQPHEGDILIFMPGQEDIE
VTCETLAERLNEIADAPQLLVLPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTV
DGIKFVVDTGYCKMKVYNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTERQY
KDDLLMGTVPEIQRTNLANTVLLLKSLGVQDLLQFHFMDPPPQDNILNSLYQLWVLGALD
NTGELTSLGRQMAEFPLDPPQCKMLIVSSAMNCTADVLIIVSMLSVPSIFYRPKGREEDS
DNVREKFQVPESDHLTMLNVYNQWKQNNYSASWCNEHFIHIKAMRKVREVRQQLKDIMVQ
QKIEIVSCGTDWDIIRKCICSAYFHQAARLKGIGEYVNCRTGMPCHLHPTSALFGMGFTP
DYVVYHELIMTSKEYMQTVTAVDGHWLAELGPMFFTVKETGKSGSAKRQTMETLQEMEGS
MRIAQEEMKARKLEEERKQLASIRKVEIITPGKWEPGTPTLRRKQGNLGL
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagatggtgtacataagttgtccggatacaatcacactgaaggtggt
ctaataattaaaaaaaaaccaaaacctgctgaacagtttgagtttaaaatacctgatgta
ccgagaggttcattgcttgggttggacaaattagctgctcaaaaacggttagaaagagaa
ttggagaaaaccaagaaatcgactttacattcctatacagataacgacgatgaaggacaa
gatgttgaagagacaaatttagaaaacgatttaaaacataaaaacaaaagccgacattat
cgatctgcccatgaagaaactccaacatacacaggagggttatcaaaacaagcaatagaa
aaacaagaaagattgaaaaaatcatataaccgtggtgtacactattcaacttcagattct
aaagataagcgaaatcgtcatcgtgacaggagaagtagtgataaaagtgacaaacggaat
cggcgtaatgaaccatattataaaaaacatgaaagaagtggtaaccgtgattatcgatca
agtagaacaccatccattagaagtaaagatgaacctttaactcctaatgtcagacttcga
gatacaccatctagaactacttgggatgaagacgatcataatatgtcttcatataaatca
tcaacttgggacatgcctacacccaagtcaagtattgatgatgatcctactagaacacct
agatttacaccagcatataagtacaataagtgggatagtcatcgtgcttcaggagcaaca
cctaaacctggaaaagaaaatgatctattatgggctagtgaatctgatcgtgatgaatgg
gaagaagcccaaaaccgattagataggcaatggtataatttagacgaaggagttgatgaa
actaataatccatttagtgatgtcagtgaatcatatgccaaaaaaaaagaacaacagtta
gctcagagtaaaaagaaacgaatgtctgcacaacaaaggcaaattaataaggacaatgaa
ttgtgggaacgtaatcgtatgttgaccagtggtgtagtagtatctgttgatatagacgag
gactttgatgaagacaatgaagccagagttcatctattggtacataacattgtgcctcca
tttttagatggccgtattgttttcactaaacaacctgagcctgttatacctgttaaagac
ccaacttctgatatagcaatagttgcaagaaaaggttcaatgttggtacggacattcagg
gaacaaaaagaacggaaacgtgctcaaaagaaacattgggaagtagctggcactgctata
ggtaacataatgggagtgaaaaaaaaagaagacgataaagatgaacgaatcgatgaagaa
ggagaaactgattacaaaactgaccaacaatttgctgaacatattaaaaacacaccagaa
gccagtagtgattttgcaagaaagaagacatatgcacagcagagacaatatttgccagtg
tttgcagccagacaagagctgttaaatatcattagggagaataacattgttattgttatt
ggtgaaactggaagtggtaagaccactcaacttacgcaatatctccatgaagaagggtac
agcaagtttggcatgattggctgtactcaacctagaagagttgctgccatgtcagtggcc
aaacgtgtttcagatgaaatgaacaccaaacttggtgatgaagtaggatacgcaattcgt
tttgaagattgtacttctgagaaaactgtaataaaatatatgactgatggtattttactc
cgagagtcactaagagatccagacttagataattatagtgctgtaatcatggatgaagct
cacgagcgatcattgaatactgatgttctatttggtctcctacgagaagtagttactaga
cgtacagatctcaaattgattgtgacatcagctacaatggatgcttctaaattttctttg
ttttttggtaatgtaccaacgtttaatattgctggtcgaactttccctgttgaagttatg
tttagcaaaaatccatgtgaagactatgttgaagctgctgtaaaacaagcattacaaata
catttacaacctcatgaaggcgatatattaatatttatgcccggtcaagaggatattgaa
gtaacatgcgaaacattagctgaaagattaaacgaaatagccgatgccccacaattgtta
gttctcccaatttactcacaattgccttcagatttacaagctaaaatatttcaaaagtcc
agtgatgggctacggaaatgtgttgtagctactaatattgctgaaacatcattgacagtt
gatggaattaaatttgttgtcgatactggttattgtaaaatgaaagtttataatcctcga
attggtatggatgcattgcaaatttatcctatcagtcaagcaaatgctaatcaaagaagt
ggtagagctggtcgtacaggtcctggacaatgtttccggttatacactgaaaggcaatat
aaagacgatttacttatgggtactgttcctgaaatccaaagaaccaatctagctaacacc
gtgttattactgaaatctttgggagttcaagacttactccagtttcattttatggaccct
cctccacaagacaacattttaaattctttataccaattgtgggtactaggcgccctagac
aatacaggagaattgacatcgcttggacgtcaaatggctgaatttccattagatcctcct
cagtgtaaaatgttaatagtgtcatcagcgatgaattgcacagctgatgtgctaatcatt
gtttccatgttatctgttccttcaattttctacagaccaaaaggtcgagaagaagattct
gacaatgtcagagaaaagttccaagttcccgaatctgaccatttaacgatgttgaatgtt
tataaccaatggaaacagaataattattcagcatcatggtgtaatgaacattttattcat
ataaaagctatgcgtaaagtccgtgaagtaagacaacaacttaaggacattatggttcaa
cagaaaatagaaattgtatcgtgtggtacggactgggacattattcgcaaatgtatatgt
tcagcttacttccaccaagccgcaagattaaaaggtattggtgaatatgtaaattgccgt
acaggcatgccttgtcatttgcatcctacatcagctctttttggcatgggctttactcca
gactatgtcgtatatcatgaactcataatgacatcaaaggagtacatgcaaactgtgact
gctgtggatggccactggttggctgagttaggtcctatgttctttaccgttaaagaaacc
ggaaaatcaggctcagctaaacgacaaaccatggaaacattacaagaaatggaaggatct
atgaggattgcacaagaagaaatgaaagcaagaaagcttgaagaagagcgtaaacaattg
gccagcatcagaaaagtggaaatcattactccaggtaaatgggaacctggtaccccaaca
cttcgtcgcaaacaaggaaatctggggttataa
DBGET
integrated database retrieval system
