Diuraphis noxia (Russian wheat aphid): 107163933
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Entry
107163933 CDS
T04900
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dnx
Diuraphis noxia (Russian wheat aphid)
Pathway
dnx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dnx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107163933
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dnx03041
]
107163933
03009 Ribosome biogenesis [BR:
dnx03009
]
107163933
Enzymes [BR:
dnx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107163933
Spliceosome [BR:
dnx03041
]
Complex A
U2 snRNP components
U2 related factors
107163933
Complex B
107163933
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107163933
Ribosome biogenesis [BR:
dnx03009
]
Eukaryotic type
90S particles
Helicases
107163933
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_22
nSTAND3
AAA_19
SRP54
ABC_tran
Microtub_bd
Myosin_head
Flavi_DEAD
AAA_7
TsaE
T2SSE
Motif
Other DBs
NCBI-GeneID:
107163933
NCBI-ProteinID:
XP_015367061
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MSKRRLDIIDPYITKNKKAEGGGQIYMKPSSSTQLQTNPYTNLPFTPKYFELHKKRIQLP
VFEYKDEFMSLLKNNQCIVLVGETGSGKTTQIPQWCVEYSSVCGRKGVACTQPRRVAAMS
VAQRVSEEMDVCLGAEVGYSIRFEDCSSSRTLLKYMTDGMLLREGMSDPMLETYQVILLD
EAHERTLATDILMGVLKEVIKQRKDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTFPVE
IFYTPEPERDYLEAAIRTVIQIHMCEEVAGDILLFLTGQEEIEEACKRIKKEIDNLGPDV
GELKCIPLYSTLPPNLQQRIFETAPPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPG
FAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRAGKCFRLYTEKAYKNEMQENTYP
EILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLSALDDDGNLTDLGN
IMAEFPLDPQLAKMLIASCSLSCSNEILSITAMLSVPQCFVRPSEAKKASDDSKMRFAHI
DGDHLTLLNIYHAFKQNNEDPQWCYDNFINYRSLKSGDNVRQQLSRIMDRFNLKRTSTEF
TSKDYYLNIRKSLTTGFFMQVAHLERTGHYLTIKDNQTVQLHPSTVLGHKPEWVIYNEFV
LTTKNYIRTVSEVKPEWLLKYAPQYYDLQNFPQCEAKRQLEIIQAKLDTKQWQEGY
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgacgtcttgatataattgatccatacatcactaaaaacaaaaaggctgaa
ggaggaggacaaatttatatgaaacctagttcttctactcaattacagacaaatccttac
actaatttaccatttactcctaagtattttgaacttcataagaaacggatacaattacct
gtatttgagtacaaagatgagtttatgagtcttttaaaaaataatcaatgtattgtccta
gttggtgaaactggttcaggaaaaactactcaaataccacaatggtgtgtagaatattca
tcagtttgtggccgcaaaggtgttgcatgtactcaacctcgaagagtagctgctatgtct
gtagcacagagagtttcagaagaaatggatgtttgccttggggctgaagttggttacagt
atacgttttgaagattgttcttcatctagaacacttttaaaatacatgacggatggtatg
ttgctccgtgaaggcatgtctgatcctatgttagaaacatatcaagtaattcttttagac
gaagctcatgagagaactttagctacagacattttaatgggtgttcttaaagaagttatt
aaacagagaaaagatcttaaattagttattatgtctgctacgctagatgctggaaaattt
caacaatatttcgataatgccccacttatgaatgttcctggtcgtacgttccctgtagaa
atattttatactccagaaccagaacgagattatttagaagcagcaattcgtacagttatt
caaatccatatgtgtgaagaagttgctggggatattttactatttcttacaggacaagaa
gaaattgaagaagcttgcaaaagaataaaaaaagaaattgacaatttaggtccagatgtt
ggtgaattaaaatgtattccattatattctactctacctccaaatttgcaacaaagaatt
tttgagacggctccaccaaataaggcaaatggagctataggacgtaaagtagtagtttcc
acaaatattgctgaaacatctttaactattgatggagttgtatttgtcatagatcctgga
tttgctaaacaaaaagtatataatcctcgtatccgtgttgagtcattgcttgtatctcct
attagtaaagcttctgctcaacaaagagctggtcgtgcgggtcgaacaagagcaggaaag
tgttttaggttatataccgaaaaagcttacaaaaatgaaatgcaagaaaatacatatcct
gaaatattgcgttcaaatttaggttcagtagtgttacaactaaagaaaytgggtattgat
gacttagtacattttgattttatggatcctccagcaccagaaacattaatgagagcttta
gagttacttaactatttatctgctttggatgatgatggcaaccttacagatttgggcaat
attatggctgagtttcctttagatccacaattagcaaagatgttgattgcttcatgttca
cttagttgctctaatgaaattctttcaataacagctatgttgtcagtcccacaatgtttt
gttcgaccatctgaagcaaagaaagcatccgacgactcaaaaatgaggtttgcccacatc
gatggggatcatcttaccttactcaatatctatcatgcatttaaacaaaataatgaagat
ccccagtggtgctatgataattttattaactatcgatcattaaagtctggtgataacgtt
cgtcagcaattatctcgaatcatggaccgattcaatttaaaacgaacatctacagagttt
acctccaaggattattatttaaatattcgtaaatctctaactacaggattctttatgcag
gttgcacatttagagcggactggacattatttaacaataaaagacaatcagacagtccag
ttgcatccctcaacagtgttaggtcataaacctgaatgggtcatttataatgagtttgta
ttaaccaccaaaaattacataaggactgttagtgaagtaaaacctgaatggttactcaaa
tatgctccacaatattatgatctacaaaatttcccacagtgtgaagctaaaagacaattg
gaaatcattcaagctaagctagataccaaacaatggcaagaaggatattaa
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