Desulfosudis oleivorans: Dole_2205
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Entry
Dole_2205 CDS
T00610
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
dol
Desulfosudis oleivorans
Pathway
dol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Dole_2205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dol03400
]
Dole_2205
Enzymes [BR:
dol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Dole_2205
DNA repair and recombination proteins [BR:
dol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Dole_2205
RecFOR pathway proteins
Dole_2205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
DUF815
AAA_3
nSTAND3
RNA_helicase
NB-ARC
AAA_33
bpMoxR
TIP49
TsaE
Sigma54_activ_2
NTPase_1
AAA_28
AAA_11
NACHT
AAA_18
IstB_IS21
Bac_DnaA
Rad17
AAA_17
ABC_tran
AAA_7
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ABW68009
UniProt:
A8ZUH7
LinkDB
All DBs
Position
complement(2678231..2679262)
Genome browser
AA seq
343 aa
AA seq
DB search
MKEKILTFSSDPSSPVTRHETEEDTGDDLFSLRPCDFEDYVGQDRTVETLRIAIAAAKQR
SEPLEHVLFHGPPGLGKTTLAHIIAAEMGTSLTITSGPALEKGGDLIGMLTHLKRGDILF
VDEIHRLPRTTEEFLYPAMEDFAVDFVFDKGIHARCHRYRLNQFVLVGATTRVGLLSAPL
RDRFGIFRKFDFYSRQDLARIVSRSAALMGLTIDETCTMELARRSRGTPRIVNRLLKRVR
DYVQVRHGGVITVSAIDDALALEGVDEKGLTGLDRSYLETIIQYYGGGPVGIEAIGATLQ
EETDTLVDVVEPFLLAEGLLQRTSSGRKATEAAYRHLGVQWRG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaagatacttacgttttcttctgatccctcttctccggtcacccggcatgag
acggaagaagataccggcgacgatcttttttccctgcggccgtgcgattttgaagattac
gtgggccaggaccggaccgtggagaccctgcggatcgccattgcggccgccaagcagcgg
agcgagccccttgagcatgtgctgtttcacggtcctcccggcctgggcaagaccaccctg
gcccatattattgccgctgaaatgggaaccagcctcaccattacttcgggcccagccctg
gaaaagggcggggacctgatcggcatgctgacccatctgaaacgcggcgacatcctgttt
gtcgatgagatccatcggctgccccggaccaccgaggagttcctttatccggccatggaa
gactttgccgtggatttcgtgtttgacaagggcattcatgcccggtgtcaccggtaccgg
ctcaaccagttcgtgctggtgggggccaccacccgggtggggcttctctccgcgcccctg
cgggaccggttcggcatttttcgtaaatttgatttttattcccgacaagacctggcccgc
attgtttcccggtccgcggccctgatggggctgaccattgatgaaacatgcacgatggaa
ctggcccgacggtcccggggaaccccccgcatcgtgaaccgcctgttaaagcgggtccgg
gactacgtacaggtgcgtcatggcggtgtgatcacggtgtcggccattgacgatgccctg
gcgctggagggagtggacgaaaagggattgaccggcctggaccggtcctatctggaaacc
attattcaatattacggcggcggcccggtgggcatcgaggccatcggcgccacactgcag
gaggagaccgacacactggtcgatgtggtggaaccctttctgctggccgaaggactgctt
cagcggacctcctcgggcaggaaggcgacagaggccgcctacagacatctgggggtgcaa
tggcgcggataa
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