Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0121950-00
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Entry
Os01t0121950-00 CDS
T02163
Symbol
Os01g0121950
Name
(RAP-DB) Hypothetical conserved gene.
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Os01t0121950-00 (Os01g0121950)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dosa04121
]
Os01t0121950-00 (Os01g0121950)
Enzymes [BR:
dosa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Os01t0121950-00 (Os01g0121950)
Ubiquitin system [BR:
dosa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
Os01t0121950-00 (Os01g0121950)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
RAP-DB:
Os01t0121950-00
LinkDB
All DBs
Position
chr01:join(1240943..1241308,1241614..1242351)
AA seq
367 aa
AA seq
DB search
MTQQLTFGEMISSDRSQKHLSATQEKGGQLPRPLEWSGDMVEQNKRARANGEVKQEQQQE
EEEEVEEGEVSQEETQRTGAFPLVTMAAMEQTEEETQIDVRIAVALLHCHACLQPLKPPV
FKCDEAHIVCSGCRCGHHGQLCGGAAVYSHCAELDAIVATAKVPCAHAPYGCSSYVVYAG
VADHQRACPCAPCSCPEPGCRFRSSPAALPGHLAAGHSWPVAEIAYGKPRKLAVPPPAHV
LVGEADRAVFLVSSCAVGAGAAVCVVCVRANGGGDNAAAVARYKCKLWVEVPSNDDNMAM
MTSMVRSSDLAGGFPAADKGMLLWVPPEMLHGVPGGEAAILSIRIDRAAAATPKFTTTRA
RSQKGMH
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacagctcacttttggtgaaatgatcagtagtgaccgaagccaaaagcatcta
tctgcgacccaagaaaaaggtggtcagctaccccgtccattggagtggagtggagatatg
gtggagcagaacaagagggcgagggccaatggcgaggtcaagcaggagcagcagcaagag
gaagaagaagaggttgaggaaggagaagtgagccaagaagaaacccaaaggacgggagct
ttccctctggtgaccatggccgccatggagcagacggaggaggagacgcagatcgacgtc
aggatcgccgtcgccttgctccactgccatgcttgcctccaacctctcaagcctcccgtc
ttcaagtgcgatgaggcgcatatcgtgtgctccggctgccgctgcggccaccatgggcag
ctgtgcggtggcgccgccgtgtacagccactgcgccgagctggacgccatcgtcgccact
gccaaggtgccgtgcgcccacgcgccgtacggctgcagcagctacgtcgtgtacgcgggc
gtcgccgaccaccagcgcgcgtgcccgtgcgcgccatgctcctgcccggagcccggctgc
cgcttccgcagctcgccagcggcgctccccggccacctcgccgccggccactcctggccc
gtcgccgagatcgcctacgggaagccgcgcaagctcgccgtgccgccgcccgcccacgtc
ctcgtcggggaggccgaccgcgccgtgttcctcgtgtcgtcgtgcgccgtcggcgcgggc
gccgcggtgtgcgtggtctgcgtcagggcgaacggcggcggcgacaacgcggcggcggtg
gcgcggtacaagtgcaagttgtgggtggaggtgcctagcaacgacgacaacatggccatg
atgacgtcgatggtgaggagcagcgacctcgccggcgggttcccggcggcggacaagggg
atgctgctgtgggtgccgccggagatgctgcacggcgtgcccggcggcgaggcggccatc
ctcagcatccgcattgatagagctgctgctgccacgcccaagttcacgactacacgagcc
aggtcccagaagggaatgcactga
DBGET
integrated database retrieval system
