Oryza sativa japonica (Japanese rice) (RAPDB): Os01t0377700-01
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Entry
Os01t0377700-01 CDS
T02163
Symbol
Os01g0377700
Name
(RAP-DB) Similar to NPL4 family protein.
KO
K14015
nuclear protein localization protein 4
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Os01t0377700-01 (Os01g0377700)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dosa03009
]
Os01t0377700-01 (Os01g0377700)
Ribosome biogenesis [BR:
dosa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Os01t0377700-01 (Os01g0377700)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPL4
UN_NPL4
OTU1_UBXL
Motif
LinkDB
All DBs
Position
chr01:15645013..15646068
AA seq
351 aa
AA seq
DB search
MILRIRSRDGTDRITVPDPAAATVGDLQRLIAARVTVPVPLQRLSLDPALLLPSSASAAL
LADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDDLIARQIRV
TRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLYGRVDADTKEVFVDFIYEPPQ
VGTEDVVQLMRDAQEEARVDAIAHGLGMRRVGLVFTQAVGRKTSDTGEYTMSNREVLQAT
ELQAEGGIPEWVTAIVKLEVGDDGSGDVHFEAFQMSEICVKLFKDGVLETEIGDKDDPRL
SKMRKEVVAGGKDTMEVDNDFFLVPVKISDHQVFLFFPTLLHSIMNLQFTK
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgatcctccgcatccgcagccgcgacggcacggaccgcatcaccgtgccggacccggcc
gccgccaccgtcggcgacctgcagcgtctcatcgcggcgcgcgtcaccgtccccgtcccg
ctccagcgcctctccctcgacccggcgctcctcctcccctcctccgcctccgccgccctg
ctcgccgacccggccgccccgctctcctccctccgcctctccaatggctccttcgtctac
ctctcctacccgcccgacgcccgctcctcccagccgcctccccccaaagccctctccgcc
gccggctccttcggcaagaagatgaccatggacgacctcatcgcgcgccagatccgcgtc
acccgccaggaggccccgctctgcgccgccgcctccttcgaccgcgactccgccaacgcc
ttccagctccacgtcgccgagtcgctcgccttcgctaccaagcgcgccggcttcctctac
ggccgcgtcgacgccgacaccaaggaggtcttcgtcgatttcatctacgagccgccgcag
gtcggcaccgaggacgttgtccagctcatgcgggacgcgcaggaggaggcccgcgtcgac
gccatcgcccacggcctcgggatgcgccgcgtcggcctggtgttcacgcaggcagtcggg
aggaagaccagcgacactggcgagtacaccatgtccaaccgcgaggtgcttcaggccacc
gagctgcaggcggagggcgggatcccggagtgggtcaccgccatagtcaagctcgaggtg
ggggatgatggctccggtgatgtgcacttcgaggcgttccagatgagtgagatttgtgtg
aagctgttcaaggatggtgtgctggagacggagattggggacaaagacgatccccgcctg
tccaagatgcggaaagaggtggtggctgggggaaaggatactatggaggtggacaatgac
ttcttcctggtgcctgtcaagatctctgatcatcaggtattcttattctttcctactctg
ttgcatagtataatgaacttacagtttactaaataa
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