KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os05t0539400-01
Entry
Os05t0539400-01   CDS       T02163                                 
Symbol
Os05g0539400, BGAL9, BETA-GALACTOSIDASE_9
Name
(RAP-DB) Glycoside hydrolase, family 35 protein.
  KO
K12309  beta-galactosidase [EC:3.2.1.23]
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa00052  Galactose metabolism
dosa00511  Other glycan degradation
dosa00531  Glycosaminoglycan degradation
dosa00600  Sphingolipid metabolism
dosa00604  Glycosphingolipid biosynthesis - ganglio series
dosa01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    Os05t0539400-01 (Os05g0539400)
  09103 Lipid metabolism
   00600 Sphingolipid metabolism
    Os05t0539400-01 (Os05g0539400)
  09107 Glycan biosynthesis and metabolism
   00531 Glycosaminoglycan degradation
    Os05t0539400-01 (Os05g0539400)
   00604 Glycosphingolipid biosynthesis - ganglio series
    Os05t0539400-01 (Os05g0539400)
   00511 Other glycan degradation
    Os05t0539400-01 (Os05g0539400)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dosa04147]
    Os05t0539400-01 (Os05g0539400)
Enzymes [BR:dosa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.23  beta-galactosidase
     Os05t0539400-01 (Os05g0539400)
Exosome [BR:dosa04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Os05t0539400-01 (Os05g0539400)
SSDB
Motif
Pfam: Glyco_hydro_35 BetaGal_ABD_1 BetaGal_gal-bd BetaGal_ABD2 Glyco_hydro_42
Other DBs
RAP-DB: Os05t0539400-01
Oryzabase: 8297
LinkDB
Position
chr05:complement(join(26801007..26801081,26800765..26800878,26800112..26800307,26799530..26799618,26799342..26799422,26799121..26799215,26798543..26798613,26798157..26798247,26797945..26798062,26797769..26797864,26797629..26797677,26797347..26797537,26797182..26797253,26796955..26797101,26796255..26796305,26795972..26796164,26795242..26795387,26795081..26795146,26794690..26794770))
AA seq 673 aa
MGPSRSFQNLLLLLLPLALALCSAAASGEASRRFWVENDTFWKDGAPFQIVGGDVHYFRI
VPEYWKDRLLRAKALGLNTIQTYVPWNLHEPKPLSWEFKGFTDIESYLRLAHELDMLVML
RVGPYICGEWDLGGFPPWLLTIEPTIELRSSDSTYLSLVDRWWGVLLPKIAPLLYSNGGP
IIMVQIENEFGSFGDDKNYLHYLVEVARRYLGNDIMLYTTDGGAIGNLKNGTILQDDVFA
AVDFDTGSNPWPIFQLQKEYNLPGKSAPLSSEFYTGWLTHWGERIATTDASSTAKALKRI
LCRNGSAVLYMAHGGTNFGFYNGANTGQNESDYKADLTSYDYDAPIREYGDVHNAKYKAL
RRVIHECTGIPLLQLPSKIERASYGLVEVQKVASLFDVIHNISDALKVAFSEQPLSMELM
GQMFGFLLYTSEYQEKHSSSILSIPKVHDRAQVFVSCSHGDVRKPRYVGIVERWSSKTLQ
IPSLSCSSNVSLYILVENMGRVNYGPYIFDQKGILSSVEIDGIILRHWKMHPVSLNAVGN
LSKLQLIMQMTDAEASKVSIYGDSENKLQDVSLYLNEGISEEPAFYEGHFHIDSESEKKD
TFISFRGWNKGVAFVNNFNIGRFWPAIGPQCALYVPAPILKPGDNVIVIFELHSPNPELT
IKLVKDPDFTCGQ
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggggccgtccagaagcttccagaaccttcttctcctcctcctccccctcgcgctggcc
ctgtgctccgccgcggccagcggggaggcttcgagaaggttctgggtcgagaacgacacc
ttctggaaggatggcgccccgttccagatcgtcggcggcgacgttcactacttccgcatt
gtccctgagtactggaaagatcgccttttaagggcaaaggcgctgggcttgaacacaatt
cagacatatgttccttggaatctgcatgagccaaaaccgctgagctgggaattcaagggt
ttcacagatattgaatcatatttaagacttgctcatgaattagatatgctggtcatgctt
cgtgtaggtccatatatttgtggagaatgggacttggggggatttccaccttggttactg
accatagaaccaaccatcgaactgcgttcttcagattcaacctatctttccttggtggac
agatggtggggagtactactcccaaaaatcgcaccactattatacagcaatggaggtcct
atcatcatggtgcagattgaaaatgaatttggttcatttggagatgacaagaattatctt
cattaccttgttgaagttgccagaagatatcttgggaatgacattatgctgtatacaact
gatggtggtgccattggaaatctaaagaatggaacaattcttcaggatgatgttttcgct
gctgttgattttgatactggttccaatccatggccaatatttcaactacagaaggaatac
aacttgccaggaaaatcagctcctttaagctcagaattttacactggatggctaacacac
tggggggaaagaattgcaacaactgatgctagcagtacagctaaagctcttaaaagaatt
ttgtgccgcaacggttctgctgtactttatatggctcatggtgggactaattttgggttt
tacaatggtgcaaatactggtcaaaatgaatctgactacaaggcagacctcacttcatat
gactatgatgcaccaattagggagtatggggacgtgcataatgcaaaatacaaagcacta
agaagagttatacatgaatgcactggcattcctcttctccaacttccttccaaaattgaa
agagctagttatgggcttgtagaagtacagaaggtcgcttctttgtttgatgtcattcat
aacatcagtgatgctctgaaagtggctttttcagagcagcctctatccatggaactgatg
ggccagatgtttggttttctactgtacacatcagaatatcaagaaaaacattcatccagc
atcctatcaattccaaaggtacatgacagagctcaagtgtttgtgtcctgctcacacggt
gatgtcagaaaaccgagatatgttggcatagttgaaagatggtcgagtaaaacactacaa
ataccaagcttaagctgctcatctaatgtcagcttatatatcctggtagaaaacatgggt
cgagtaaattatggaccatatatttttgaccagaagggcatactatcttctgttgaaata
gatggcattattctccgtcactggaaaatgcatccggtttcacttaatgcggtgggcaac
ctttcaaaacttcaactaatcatgcagatgactgatgctgaagctagcaaagtatccatt
tatggtgattcagaaaataagttgcaggatgtatcgctctatctaaatgaagggatttca
gaggaaccggcattctatgaaggccattttcatattgactctgaatctgagaaaaaggac
acattcatatcatttcgaggttggaataaaggagtcgcttttgtgaacaacttcaacatt
ggaaggttctggccggccattggaccacaatgcgctctgtatgttcctgcgccgatcctc
aaacctggagataatgtcattgtgatctttgaactgcatagtccaaaccctgagctcacc
atcaagttagtgaaggatccagatttcacatgcggccagtga

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