Desulfosarcina ovata subsp. sediminis: DSCO28_19460
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Entry
DSCO28_19460 CDS
T06286
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DSCO28_19460 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dov01007
]
DSCO28_19460 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dov03016
]
DSCO28_19460 (lysS)
Enzymes [BR:
dov01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DSCO28_19460 (lysS)
Amino acid related enzymes [BR:
dov01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DSCO28_19460 (lysS)
Transfer RNA biogenesis [BR:
dov03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DSCO28_19460 (lysS)
Prokaryotic type
Other AARSs
DSCO28_19460 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BBO81380
UniProt:
A0A5K7ZQ26
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All DBs
Position
2095831..2097357
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AA seq
508 aa
AA seq
DB search
MQAGIQSGDSMDNAKDLLSKRKEKADGLKADGINLFPNGFTANHTIRDISAHIETLPEEQ
KEDTAGFTVAGRMMAINRFGKSAFIRFRDRSGLMQAYIRKDQVGDSAYDMFKRLDVGDFV
GIQGSLFRTKTGEWTILATTLTLLCKSTRPLPEKFHGLKDPEKRYRQRYIDLIMNPDIQE
IFIRRSRIIQAMRNFFLSRDFLEVETPMMQPIPGGAEATPFITHHNALDIDLYLRIAPEL
YLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMVEFYQAYATYEDLMDLTEAMLGEIT
RSITGGTRITYQDHEIEMGGSWKRLPLFDALEQIGGVDPALFTDKAKLLEFAATKGITVT
KTERLGKVITKLFDALVEPHLIQPTFITGYPAEVSPLSRRSDIQPDLTERFELFIAGREL
ANGFSELNDPEDQRGRFLQQVEDREAGDSEAHFMDDDYIEALEYGMPPTAGEGIGIDRLV
MLLTNAASIREVILFPHMKPRAGVPKGA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccggcattcaaagcggagacagcatggacaacgcaaaagatctgttgagcaaa
cgaaaagagaaagcggacggcctgaaagcggatggaatcaatctctttcccaacggcttc
accgccaaccataccatccgggatatcagcgcccatattgaaacgctgccggaagaacaa
aaagaggacactgcgggttttaccgtagccggccgaatgatggccatcaaccgtttcggc
aaatccgccttcatccgtttccgggaccggtccggtctgatgcaggcatatatccgcaaa
gaccaggttggcgactcggcctacgacatgttcaaacggcttgatgtgggtgattttgtc
ggcattcaagggagtctgtttcgcaccaaaaccggagagtggaccattctggccaccacg
ctgacgctgctgtgcaaatccacccgtccgctgcccgaaaaattccacgggctgaaagac
cccgaaaaacggtaccggcagcgctatatcgatctaatcatgaacccggatattcaggaa
atcttcattcgacgcagccgaatcattcaggccatgcgcaacttcttcctttcccgggat
ttcctggaggtagagacccccatgatgcagccgattccgggcggtgccgaggccacccct
tttatcacccaccacaacgccctggatatcgacctttacctgcgcattgcaccagagctt
tacctcaagcggctggtggtgggcggtttcgagcgggtttttgagatcaaccgcaacttc
agaaacgaaggtgtctccactcggcacaatccggaattcaccatggtggagttttaccaa
gcctatgccacctatgaagatctcatggatctgaccgaagcgatgctgggcgagattacc
cgatcgattaccggcggcacccggatcacctaccaggaccacgaaattgaaatgggcgga
tcctggaaacgcctccccctcttcgatgccctggagcagatcggcggcgtggatccggcg
ttgttcacagacaaggccaaactgctcgaatttgccgcgaccaaaggcattaccgtaacc
aaaaccgaacgcctgggcaaagtcattaccaaactgttcgacgcgctggtcgagccccat
ctgatccagcccacctttatcaccggttacccggccgaagtttcaccgctctccagaaga
agcgacatccaaccggatctgaccgaacggttcgaactgttcatcgccggccgtgaactg
gccaacggcttttccgaactcaacgatccggaagaccagcggggtcgttttctgcagcag
gtggaggaccgcgaggccggggacagcgaagcccacttcatggatgacgactatatcgaa
gccctggaatacggcatgccgcccaccgccggagaaggcattggcatcgatcggctggtc
atgctgctcaccaatgccgcatcgatccgtgaggtgattctgtttccgcacatgaaaccc
agggcgggggttcccaaaggcgcctaa
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