Desulfosarcina ovata subsp. sediminis: DSCO28_59250
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Entry
DSCO28_59250 CDS
T06286
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
dov
Desulfosarcina ovata subsp. sediminis
Pathway
dov03030
DNA replication
dov03430
Mismatch repair
dov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSCO28_59250 (dnaQ)
03430 Mismatch repair
DSCO28_59250 (dnaQ)
03440 Homologous recombination
DSCO28_59250 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dov03032
]
DSCO28_59250 (dnaQ)
03400 DNA repair and recombination proteins [BR:
dov03400
]
DSCO28_59250 (dnaQ)
Enzymes [BR:
dov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSCO28_59250 (dnaQ)
DNA replication proteins [BR:
dov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSCO28_59250 (dnaQ)
DNA repair and recombination proteins [BR:
dov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSCO28_59250 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BBO85359
UniProt:
A0A5K7ZYL6
LinkDB
All DBs
Position
complement(6767566..6768327)
Genome browser
AA seq
253 aa
AA seq
DB search
MGTLFTARMMNRLLQLRLHKRCLPPLAAANLASLAHLDASRPAGKYAYTVVDLETTGLDF
RKDRIVSIGAVKLIDERIHLGRMFNQLVNPGRHMPAQAITIHGIVPSMLASAPSGMDTLD
GFLDFLGSDILVAHPAWFDVAFLNRLMQARYGFRLQNLTIDNRLLCERLLLTKMLPALPR
KPGLLGNDAADPERHRKQPDLEKIAHQLGIRIYQRHSAVGDALATAMILQRCLAKLTQTG
RGRLRDLIRSGTV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggggaccctgtttacggcccgcatgatgaaccgcctgctgcagctgcgcctgcacaag
cggtgcctgccgccattggccgccgccaatctggcctccctggcccatctggatgcgtcc
cgcccggccggcaaatacgcctatacggtcgtcgacctggagaccaccggcctggatttc
aggaaagaccgcatcgtcagcatcggtgccgtcaagctgatcgacgaacgcatccacctg
ggccgaatgttcaaccagctggtcaatccgggccgccacatgccggcacaagccatcaca
atccacgggattgtcccgtccatgctggcctccgcgccctcgggcatggacacgctggac
ggttttctggactttctgggcagcgatattctcgtggcccatccggcctggttcgatgtc
gcgtttctcaaccgtctgatgcaggcccgctacggcttccggttgcagaatctgacaatc
gacaaccgtctcttgtgcgaacggctcctgctgaccaaaatgctgccggcgctgccacgc
aaacccggccttttgggaaacgacgcggccgatccggaacgacaccggaagcagcccgac
ctcgagaagatcgcccaccagctgggaatccgcatctatcaacggcacagtgccgtgggc
gacgccctggccaccgccatgatcctgcaacgctgcctggcaaaactgacgcagaccggc
cggggccggctgagagacctgatccggtccggcaccgtctga
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