Dendroctonus ponderosae (mountain pine beetle): 109544214
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Entry
109544214 CDS
T04899
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
dpa
Dendroctonus ponderosae (mountain pine beetle)
Brite
KEGG Orthology (KO) [BR:
dpa00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109544214
Enzymes [BR:
dpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109544214
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
RWD
DEAD
zf-CCCH
zf_CCCH_4
zf-CCCH_4
UBA
HA2_N
AAA_22
zf-CCCH_2
AAA_19
nSTAND3
ResIII
ATPase
AAA_23
T2SSE
Torus
ABC_tran
NACHT
AAA_16
Motif
Other DBs
NCBI-GeneID:
109544214
NCBI-ProteinID:
XP_048516769
EnsemblRapid:
LOC109544214
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MNCEQVINNADLLLRQPVTARVSAIKEPPKLMNVKQELQFLRLTDPIEEQILETLKYLHG
PEFKLNSIADYKDTNSNVLKKYWVGQGSLVVRGGCDYSQSKDAPLEEEERLKLFALMRLQ
SYGFHENHCIEAFKYCNNSIEDALYLLYSKYLKIEDKSMVEHGLTQSELLDMRADEKSSL
ESIYETQFKEKVEDVWTVSMKVEYLFNLFHNKKPTRKPVPKKAKEKCKNFLKGGTCRFGS
KCRFSHEVDVVENDDNAHLEQHCFELEFRFQKSSNYPYEPPMIFLKSNVCMPPLMSLHIC
KRLHQEAQYLALDGIPCVYGVTELLNNEDIIKEHLKTDVEFLHPKQKLFSSEIIVKSFKS
RPTHYRKGATSKDNKRRLTIDEIAKEDERIIRDFSEKKLSSKYGEMLGARKKLPAWTLRN
DILNFIQQSQVVVISGETGCGKSTQVPQFILDDWISNYNQKHLEIVCTQPRRISAIGVAE
RVANERLENAGSTVGYQIRLESKVSSRTRLTFCTTGILLRRLESEPTLPNVTHIIVDEVH
ERSDESDFLLLILKDLLPLRSDLKVILMSATLNAVLFSEYFGDIPVINIPGRTFPVEQYY
LEDILEATGYILEDGSEYCRKMKNDSEYIDAVMAGNELTVIKPRDNIRDENLTVQQMMAR
YEDFSPKTCKTLFLMDSDKINNDLIETILMWIVNGSHDYPKSGTILVFLPGIGEITSLYD
QLVVHEEFGRRRRKYIVLPLHSSLTSEEQAAIFSKPKNGERKIVISTNLAETSVTIDDCV
FVIDSGKMKEKHFDSNRNMESLETVWVTQANGLQRKGRAGRVMPGVCIHLYTRHRFMNHF
LPQPIPEIHRIPLEQLVLNIKVLPGLCERDVNEVLGSFIEPPIPENITSAIGRLQSVGAI
DKADNLTPLGHHLASLPVDVRIGKLMLYGAMFGCVDAALTIAACLSHKNPFVSPFGKRDE
AHKKKMTFSAHFSDHITVLIAYKKFLEMCKKSPAAARNFANENYLSHRALFTIADIKYQF
LELLVDIGFVSVDLSRNKRRTGKDLVQDITGSEFNANGENFRLLSSILCAALYPNIVKVL
TPSKTYIQSAVGAVPKQNEAKDIKFATPKEMVFMHPSSVNYTINSFPSAYLVYQEKVRTS
KIFFRDCTMVPVIPLVLFSGDLEIIVQNGSTFLTLEDGWILFQVEEHKTAEMIKMIRTEL
YNLLEEKIKDPLLNLRHNDRGDRVISTILQLLNL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaactgtgaacaggtgatcaacaacgccgatttgttactcaggcaaccggtgacagca
cgagtttccgccataaaggaacctccaaaactaatgaatgttaaacaagaacttcaattc
ctcagactgactgaccccatcgaagaacaaatattggagacattaaagtaccttcatgga
cccgaatttaaattgaacagtatagctgactacaaagacacaaattcgaatgttctgaaa
aaatattgggttgggcagggctccttggtggtcagaggaggttgtgattattcacaaagc
aaagatgcccctttggaggaagaagaaagattgaaactgttcgctttgatgaggctacaa
agttatggattccatgaaaaccactgcatagaagcgtttaaatactgtaacaactctata
gaggatgccctctaccttctctactcaaaatacctaaaaattgaagacaaaagtatggta
gaacatgggttaacacagtcagagcttctggacatgcgggcagacgaaaagagttcgcta
gaatccatttatgaaacgcagtttaaagaaaaagtcgaagatgtttggacagtgagcatg
aaagtagaatatctgttcaacctcttccataataagaagccgactcggaagccggttccg
aagaaggctaaagaaaaatgcaaaaattttctaaaggggggtacgtgtaggttcgggtcc
aaatgtcgattttctcatgaagtggacgtggttgaaaatgacgacaatgcgcacctagaa
cagcattgcttcgaactggagtttcgctttcagaaaagttccaattatccgtatgagcct
ccgatgatttttctaaaatctaacgtttgtatgcctccgcttatgtctttgcatatttgt
aaacgactgcaccaggaagctcaatatttggctctagatggtattccctgcgtttacgga
gttacggaattgttaaataacgaggacattattaaggaacatctgaagacagatgtggaa
tttttacatcccaagcaaaagctattttccagtgaaataattgtaaagagcttcaaatca
cgtcccacgcactaccgcaaaggggctaccagcaaggacaataaacgacgccttactata
gatgaaattgccaaggaagacgaacgaatcatcagagacttcagtgagaaaaagctgagt
agcaagtacggtgaaatgttgggggccaggaaaaagcttcctgcttggacgttgaggaac
gatattttgaatttcatccagcagtcgcaagtggtggtcataagcggtgagactggatgc
ggcaaaagcactcaagtgccccagttcatccttgacgactggatttccaactataatcag
aaacatttggaaatagtgtgcacgcagcccaggcgaatatcagccatcggtgtggctgag
agggtggcaaacgagcgattagagaacgctggaagcacagtcggttaccaaataaggctg
gaaagcaaagtttcatcgcggacaaggttgaccttttgtactacgggaattttgttgaga
cgactggagagcgagcctacactgcccaatgtgacgcatatcattgtagatgaagtccat
gaaagaagtgatgaaagcgattttcttctgctcatcctcaaagatttgttaccactccgc
tcggaccttaaggtgatcctcatgagcgccacgttaaacgcagtgttattctcggaatat
tttggtgatattcccgtcattaacataccaggccggacattccctgtcgaacagtactac
ttggaagatatcttagaagcgaccgggtacatactggaggacggttcagagtattgcagg
aaaatgaaaaacgactctgagtacattgatgcagtgatggcgggcaacgaattgactgtg
atcaaaccccgagacaatatcagggatgaaaacttaacagtgcaacaaatgatggcaaga
tacgaggatttcagccccaaaacgtgcaaaactctctttttaatggattcggacaaaata
aacaacgacctgatagagacgatcttgatgtggatcgttaatggcagtcatgattaccca
aaatcaggcaccattctcgtgtttctgcctggtataggagaaatcacttccctttacgac
cagttggtggtgcatgaggagttcggtcggagacgccgcaaatacattgtgctgccatta
cattcctccctaaccagcgaagaacaggcggcgattttcagcaaaccgaaaaacggcgaa
cgtaaaatcgtcatctcgaccaatttggctgagacctcagtgaccattgatgattgcgtg
tttgtgatcgattctggaaagatgaaagaaaagcatttcgactcaaatcgaaatatggaa
agtttggaaaccgtttgggttacgcaggccaatggattgcaacgtaaaggacgcgctggt
cgcgtgatgcccggagtctgtatccatttgtatacaagacaccgatttatgaaccatttt
ttgccgcaacctataccggaaatacaccgaattcctctcgaacaacttgtattaaatatc
aaagtgttgcctggactctgtgaacgggacgtcaatgaggttttagggtcgtttatcgaa
ccaccaatcccagaaaatatcacgtcagccataggacgattgcaaagtgttggcgctatt
gacaaagcagacaatctcacccctctgggacaccatttagcctcattgcctgtcgatgtg
aggattggtaaactgatgctttatggcgcgatgtttggctgtgtggatgcagctctcaca
attgctgcttgcctcagccacaaaaatccgtttgtttctccatttggcaaacgagatgaa
gcccacaagaagaaaatgacgttttcagcccactttagcgatcatattactgttctgatc
gcttataagaaatttttggagatgtgcaaaaagagtcctgccgcagcgcggaactttgca
aacgaaaactacctttcccacagagctctgtttacgatagccgacataaagtatcagttc
ctggaactgttggttgatattgggttcgtgtctgttgatttgagccgcaataagcgaaga
actggcaaagacctcgtgcaagacatcaccggctcagagttcaatgckaatggggaaaac
tttcgattactgtcatcgattttgtgtgcagctctatatccgaacattgtaaaggtgctc
actccatccaaaacgtacattcaragtgcggttggggcggtcccaaagcagaatgaagcc
aaggatattaaatttgccacccccaaggaaatggtttttatgcatccaagttcagtgaat
tacacaatcaatagctttcctagtgcatacttggtctaccaggaaaaagtgcgaactagc
aaaatattctttagggattgtactatggtgcccgtaattcctctggtgttgttctccgga
gacctagagattatcgtgcaaaatggaagcacgtttctaactttggaagatgggtggatt
ttgtttcaagtcgaagagcacaagacagcggaaatgatcaaaatgatcagaacggagtta
tacaatttgctggaagagaagatcaaggatcccctgttgaacttgcggcacaatgatcgt
ggggaccgggtcatatcgactattctacagctacttaacttgtga
DBGET
integrated database retrieval system
