Dietzia psychralcaliphila: A6048_05825
Help
Entry
A6048_05825 CDS
T05437
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
dpc
Dietzia psychralcaliphila
Pathway
dpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A6048_05825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpc03400
]
A6048_05825
DNA repair and recombination proteins [BR:
dpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A6048_05825
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A6048_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
AWH95078
UniProt:
A0A2T5AKP9
LinkDB
All DBs
Position
1308865..1309743
Genome browser
AA seq
292 aa
AA seq
DB search
MHPFTDSGLVVRTYDLGEADRIVTLLTEHHGLVRAVARAVRRTRSRMGASLEPFAVVEVQ
IAPGRGRSGLGTVRQASSRESLARPLVADYPAYTSGCVVLETAERLAGEEGAPTPRLLGL
AVGALRSLAEHRRPPGLVADAFLLRAMAASGWEPVLDCCVSCGVVGPHRAFHVASGGTVC
VHCRPQGCAMLSPGVAEHLSALLGGDWDAVTVSSPAVVRQASGIAAAHLQWHLERDLRSL
PLVDRGTVDPVPVEPRPVDPRPVDPVLVDSVPVVPRPSETVEESRARTTQIP
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcacccgttcaccgacagcggcctcgtcgtgcgtacctacgacctcggcgaggccgac
cggatcgtcaccctgctcaccgaacaccacgggttggtcagggcagtcgcccgcgcagtc
cgccgtacccgctcgcggatgggcgccagcctcgagccgttcgccgtggtggaagtacag
atcgcaccgggtcgtggccggagtggtctgggcaccgtgaggcaggcgtcgagccgggag
tcactggcacggcctctcgtggcggactacccggcctacacctccgggtgcgtggtgctg
gagaccgcggagcggctggcaggggaggagggcgcacccacgccgagactgctcggcctc
gccgtcggcgccctccgctccctggccgaacaccgtcgcccgccgggactcgtcgccgac
gcgttcctcctacgtgccatggccgcgtccggctgggaaccggtcctggactgctgtgtg
agctgcggagtggtgggtccgcaccgggcgttccacgtcgcatccggggggaccgtgtgt
gtgcactgcaggccgcaggggtgtgccatgctctcccccggtgtcgccgagcacctgtcg
gcgctgttgggtggggactgggacgccgtgaccgtctcgtccccggccgtcgtccgccag
gcctccgggatcgccgccgcacacctgcagtggcatctcgaacgcgacctgcgcagcctg
ccgctggtcgatcgcgggacggtcgaccctgttcccgtcgagccccgtcccgtcgacccc
cgtcctgtcgacccagttctcgtcgactcagttcccgtcgtaccccgtccctccgaaacc
gttgaggagtcccgtgcccggactacccagattccgtaa
DBGET
integrated database retrieval system