Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_55353
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Entry
DICPUDRAFT_55353 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DICPUDRAFT_55353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_55353
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DICPUDRAFT_55353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
10501765
NCBI-ProteinID:
XP_003288330
JGI:
Dicpu1_55353
UniProt:
F0ZLQ1
LinkDB
All DBs
Position
Unknown
AA seq
979 aa
AA seq
DB search
MASSAISTPSRSRKQVITFDDDDDEEEDDNNDDEDDSNSSQKKQKGKPFGKKDKKEIEQR
YSFLVDVKDGNGNKKGSPDYDPRTLQIPASCLTKFSPFERQFWDIKSKYYDTVVFFKKGK
FYELYENDADIGHQILHLKMTDRVNMRMVGVPESAFTHWASKLINLGYKVAKVDQMETSI
GMNKRQNEKGGRNKKDSIIQRELTSILTAGTLLDESMISDKTSTYLMAIKEDEYSNKYGV
CFVDVSIGEFFLCSIDDDENRMQFETLLLQMMPKEVVYEKGAISAKTMSIMKRVLATVKP
VMNARLSLEYWDPSETLNRVNDSCGRIPESLKEMKNETLLICSLGGCLSYLSDIKIAQQV
LEQGRFKRFNSLDVGNSLILDGQCLVNLEIFNNSTDGTTEGTLFKLMDRCVTSFGKRLFR
QWICRPLANKERIVDRQRAIEHLRDNPDHLQKVISILTKIPDLERMLARIRAGSSKIADL
ISVLNHFEAIHSKLEEFEKKMEDFEQEQINGNYSGYPNLLRYITTIKESFKVEQDKIIPS
KGLFKEFDECQKKIQQIEQSLEEHLTEQKTYFSCRNIEFKHMGKEIYQIEVPVSALNRAK
LPKNYQLKSKTKAACRYHTPFIIETLPSLLEERDELEVLSKEVSKKIQANFSVYFNHFSK
AVQRLAQLDCLLSLFKVSCQSGIQMCRPIFVSKIPTNNGGFLDVRDMRHPCIYSKAGDDF
IPNDLSLNVENSPPSILVLTGPNMGGKSTLLRQACILVIMAQMGCFVSASSCEMSIVDRI
FTRLGANDNILAGQSTFMVELQETCSVLKYATNRSLVILDELGRGTSTFDGYSIAYSVLN
YITKNLKSLCIFATHYQSLAMEPSIRNEISTGYMTCQVDEEEKRVIFLYKLAKGICQKSY
GLHVAAMAGLPKEIVAKAEKKSEQMEKESVLVSYIHGTIHRSEMVKKIITAFKNKDHSDL
KILSDTLKKLDLNNNIPDQ
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatcggcgatttcaacaccaagcaggtcaagaaaacaagtgattacatttgat
gacgatgacgatgaagaagaagatgacaacaatgacgacgaagatgacagcaatagctct
caaaagaaacaaaaaggcaaaccatttggcaaaaaagataaaaaagagattgaacaaaga
tattcatttttggttgatgtcaaagatggaaatggtaataaaaagggatctccagactat
gatccaagaactcttcaaatccctgcaagttgtttaactaaattttctccattcgaaaga
caattttgggacatcaaatccaaatattatgatacagtggtattttttaaaaagggtaaa
ttctatgaactatatgagaatgacgcagatattggccatcaaattttacatttaaaaatg
acagatcgtgtaaatatgcgtatggtgggcgttccagaatctgcatttactcattgggca
tcaaaattaattaatttgggttataaagttgctaaagtcgatcaaatggaaacttcaatt
ggtatgaataaaagacaaaatgaaaaaggtggccgtaataaaaaagactcaattatccaa
cgtgaacttacatcaattcttacagccggtactcttttggatgaatctatgatctccgat
aaaacatcaacctatttaatggcaattaaagaagacgaatacagtaacaagtatggtgta
tgctttgtcgatgtttcaattggcgagtttttcctttgctctattgacgatgacgaaaac
cgtatgcagtttgaaacccttttacttcaaatgatgccaaaagaagttgtatatgaaaaa
ggtgcaattagtgctaaaacaatgtcaatcatgaaaagagtattggccacagtcaaacca
gttatgaatgcccgtttatcattggaatactgggatccatctgaaactttaaatcgtgtc
aacgattcatgtggtaggattccggaatcattgaaagaaatgaagaatgaaacactttta
atatgctcattaggtggttgccttagttatttaagtgacattaaaatagctcaacaggtt
ttagaacaaggtcgtttcaaacgtttcaattcattggatgttggaaactctttaatttta
gatggtcaatgcttagtaaatttagaaatctttaataactctaccgatggtaccaccgag
ggtacacttttcaaactaatggatagatgtgttacttcgtttggcaaacgtttatttaga
caatggatttgtagaccattagctaataaagagcgtattgtagatagacaaagagcaata
gaacatcttagagataacccagatcatctccaaaaagttatttcaattctcacaaaaata
ccagaccttgaaagaatgcttgcaagaattcgtgcaggttcatcaaagatcgcagattta
atttcagttttaaatcactttgaagcaattcatagcaaattggaagagtttgaaaaaaaa
atggaagatttcgaacaagaacaaatcaatggtaattattcaggctatcctaatttattg
agatatattacaaccatcaaagaaagttttaaggtcgagcaagataaaataattccatca
aaaggtcttttcaaagagtttgatgaatgtcaaaagaaaattcaacaaatagaacaatca
ttagaagaacatctaacagaacaaaaaacatatttttcatgtcgtaatattgaatttaaa
catatgggtaaagaaatttatcaaatcgaagtgccagtatccgccttaaatcgtgccaaa
cttccaaaaaattaccaactaaaatcaaagaccaaagctgcctgtagatatcatacccca
ttcattatcgaaacactaccaagtcttttagaagagcgtgacgagcttgaagtgctatca
aaagaagtgtcaaagaaaatccaagcaaactttagtgtttattttaatcatttctcaaaa
gctgttcaaagattagcacaattggattgtttattatcattatttaaagttagttgccaa
tcaggaattcaaatgtgtcgtccaatttttgtttcaaagattccaacaaacaatggtggt
ttccttgatgttagagatatgagacacccttgcatctattcgaaagccggggatgacttt
attccaaatgatctttcattaaatgttgaaaactccccaccatcaatcttagttctcaca
ggtccaaatatgggtggtaaaagtaccttattacgtcaagcatgtattttggttattatg
gctcaaatgggttgttttgtctctgcatcaagttgtgaaatgtcaatagtagatcgtatt
ttcactcgtttgggtgccaacgataatattttagctggccagtcaacatttatggtagag
cttcaagaaacttgctcagtactcaaatatgccaccaatcgatcattagttattcttgat
gaactaggaagaggaaccagtacattcgatggctattcaattgcttactctgttttaaat
tatatcactaaaaacttaaaatccctttgtatttttgcaacccattaccagtctctagct
atggagccatcaattcgtaatgaaatctccacaggatatatgacttgtcaagtagacgaa
gaagagaaaagagtaattttcctttacaaattagcaaagggtatttgccaaaaatcatat
ggtttacatgttgctgcaatggctggtttaccaaaagaaattgttgccaaagctgaaaag
aaatctgaacaaatggaaaaagaatcagttttagtctcctatatccacggtacaattcac
agatccgaaatggttaaaaagattattacagctttcaagaataaagaccacagtgattta
aaaattttatcagatactttaaaaaaacttgatttaaataataacatcccagaccaataa
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