Dictyostelium purpureum (cellular slime mold): DICPUDRAFT_86223
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Entry
DICPUDRAFT_86223 CDS
T02090
Name
(RefSeq) hypothetical protein
KO
K10610
DNA damage-binding protein 1
Organism
dpp
Dictyostelium purpureum (cellular slime mold)
Pathway
dpp03420
Nucleotide excision repair
dpp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
DICPUDRAFT_86223
09124 Replication and repair
03420 Nucleotide excision repair
DICPUDRAFT_86223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpp04121
]
DICPUDRAFT_86223
03400 DNA repair and recombination proteins [BR:
dpp03400
]
DICPUDRAFT_86223
Ubiquitin system [BR:
dpp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Adoptor protein
DICPUDRAFT_86223
DNA repair and recombination proteins [BR:
dpp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
DICPUDRAFT_86223
TCR (transcription coupled repair) factors
Cul4-CSA complex
DICPUDRAFT_86223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
TruB_C
Motif
Other DBs
NCBI-GeneID:
10510272
NCBI-ProteinID:
XP_003284366
JGI:
Dicpu1_86223
UniProt:
F0ZAA4
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MDQEGLKPMFDVNIYGRISVLKLFSAGGKQDYLFISTESFKFCILAYDSEKKEIVTKASG
NAEDTIGRPTEAGQLGIIDPDGRLIALHLYEGLLKLINIEKGLNNPIQKTAANTRLEELQ
VMDMTFLYGCKIPTIAVLFKDTKDEKHIVTYEVSQKDQELCPGPWSQSNVGVYSSMLVAV
PLGGVLVVADNGITYMNGRTTRSIAIPYTKFLAYDRVDKDGSRYLFGDHFGRLSVLVLLN
HQQRVTELKFETLGRTSIPSSISYLDSGVVFIGSSSGDSQLIRLNTEKDPATDSYISHLE
NFTNIGPIVDFCLVDTEKQGQAQIVTCSGTYRDGTLRVIRNGIGIAEKALIELEGVKGLW
PIKENDPSDPLNPKDQYLIVSFIGYTKVLQFQGEEIEETEFEGLDSNSSTILCSNIDKEN
VIVQVTNQAINLINPITFKRVDQWKSPSGSPINLVSSNQSQIALSIGKSLYYFEINEQSR
IELIKEIELPHEISCIDISPLDSFMDSRSQICAVGLWTDITLRLFKLPTLEEIHKEPLGG
EIIPRSILMISFEGIDYIFCSLGDGHLFKFKIDIANNWKLFDKRKLTLGTQPIILKKFKL
KNTINIFALSDRPTVIYSNNKKLFYSVVNLKEVTNVTSFNSDAFPGSMAISSESSLIIGT
IDEIQKLHIKTISLNGEMARRIVHLEEYSCYAVITIKTNEDIISGNGENATTIDEVEEEV
SYVRLFDDQTFEPLSSFRLEHYEMGWSLTSTKFDDDPCTYLAVGTSINIPDRQTSGRVLL
FNINEAKKLVLLEEISFRSGVLYLHQFNGRLIAAVLKRLYSIRYSYSKEKNCKVISSENV
HKGHTMILKLASRGHFMLVGDMMKSMSLLGQSENGSLVQIAKNPQPIWIRSIAMINDDYF
IGSETSNNFVVVKKNNDSTNELERELLDSVGHYHIGESINSMLCGSLVRLPDSDAPPIPT
ILYASVNGSIGVIASISKEDYEFFSKLQKGLNRVVNGIGGFTHESWRAFSNDHHTVESRN
FIDGDLIEMFPDLKIESMAKVIQDMNVTLDETLKRIESLMQYIR
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagagggattaaaaccaatgtttgatgtaaatatatatggtagaatttcagta
ttaaaattattttcagcaggtggtaaacaagattatttatttatatcaacagaaagtttc
aagttttgtatattagcatatgacagcgaaaaaaaagagattgtaacaaaagcttcagga
aatgcagaggatactattggcagaccaacagaggcaggtcaattgggcattatcgatcca
gatggcagattaattgcacttcatctatatgaaggtttattaaagttaataaatattgaa
aaaggattaaacaacccaattcaaaagactgcagcaaatacacgtttggaagagttacaa
gtaatggatatgacatttttatatggttgcaaaattcccaccattgcggtactttttaaa
gatacaaaagatgaaaaacatattgtaacctacgaagtctcccaaaaagatcaagaacta
tgcccaggtccatggtctcaaagtaatgttggtgtttatagttcaatgttggttgctgtt
ccattaggtggtgttttagttgtcgcagataatggtataacctatatgaatggtcgtact
actcgttcaattgcaattccatataccaaatttttagcatacgatcgtgtagataaagat
ggatctcgttatttatttggtgatcatttcggtcgtctttctgtattagtattattgaac
catcaacaacgtgtaactgaattaaaatttgaaacacttggtcgtacaagtatcccaagt
tcaattagttatttagacagtggtgtagtttttattggtagtagttctggcgattctcaa
ttaattcgtttaaacacagaaaaagatccagccaccgatagttatattagccatttagaa
aactttacaaacattggtccaatcgttgacttttgtttagtcgatacagagaagcaaggt
caagcccaaatcgtcacatgctcaggtacctatagagatggaacattaagagttattaga
aacggtattggtattgcagagaaagcattaatcgagcttgaaggtgttaaaggattatgg
cccatcaaagaaaatgatccttcagatccattaaatccaaaagatcaatatttgatcgta
tcatttattggctataccaaagtattacaattccaaggcgaagaaattgaagaaactgaa
tttgaaggtttagattcaaactcatcaactattttatgctccaatatcgataaagaaaat
gttattgttcaagttaccaatcaagcaatcaatttgatcaatcctatcacatttaaacgt
gttgatcaatggaaatctccaagtggatcaccaattaatttagtatcaagtaatcaatct
caaattgccctttcaatcggtaaatcattatactatttcgaaatcaatgagcaatctcgt
atcgaattaattaaagagattgaactaccacacgaaatttcttgtattgatatttcgcca
ttggatagcttcatggattcacgatcccaaatttgtgcagtaggtttatggaccgatatt
actttacgtcttttcaaattaccaacattagaagagattcacaaagaaccattgggtggt
gaaattataccaagaagtattttaatgatctcttttgagggtatagattatatattttgt
tcattaggcgatggccacttatttaaatttaaaatcgatatagcaaataattggaaatta
tttgataaaagaaaattaactttaggtacacaaccaattatattaaaaaagtttaaatta
aaaaatactataaatatttttgcattatcagatagaccaactgtaatttatagtaataat
aaaaaattattttattcagttgtaaatttaaaagaggtcactaatgttacatcattcaac
tctgatgctttcccaggttcaatggcaatttcatcagaatcatcattgattattggcacc
attgatgaaattcaaaaacttcatattaaaactatatcattaaatggtgaaatggcaaga
agaattgtccacttggaagaatattcatgctatgcagttattacaatcaaaactaatgaa
gatattataagtggaaatggagaaaatgctacaactattgatgaggttgaagaggaggta
tcctatgtacgtttgtttgatgaccaaacattcgaaccattatcatcatttagattagaa
cactacgaaatgggatggtcactaacctcaaccaaatttgatgatgacccatgtacatat
ttagcagttggtacatcaatcaacataccggatcgtcaaacaagtggtcgtgtattatta
ttcaatattaatgaagccaagaaattggtattattagaagaaattagttttagaagtgga
gtactctatttacaccaatttaatggtcgtcttattgcagcagtcctcaagaggttatat
tccatcagatatagttactcaaaagaaaagaattgtaaagtaatttcaagtgaaaatgta
cataaaggccatactatgatccttaaattagcctctagaggtcatttcatgttggttggt
gatatgatgaagtcgatgagtttactaggtcaatctgaaaatggatcattggttcaaatt
gccaaaaacccacagccaatttggattcgttcaatcgctatgattaatgatgattatttt
attggttcagaaactagcaataatttcgtagtagtcaaaaagaataacgactcaaccaat
gaattagaaagagaactattagatagtgttggtcattatcatattggtgaaagtataaac
tctatgctttgtggttcattagtacgtttaccagactcagatgctcccccaattccaaca
atactctatgcctctgttaatggttccattggtgtcatcgcttcaatttccaaagaagac
tatgaatttttctcaaagttacaaaaaggtcttaatcgtgtagttaatggtataggtgga
tttactcatgaatcttggagagccttttcaaatgatcaccatacagtcgaatctcgtaat
ttcattgatggtgatttaattgaaatgttcccagatctcaagattgaatcaatggcaaaa
gtaattcaagatatgaatgtaactttagatgaaactttaaaaagaattgaatcattaatg
caatacattcgttaa
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integrated database retrieval system
