Daphnia pulex (common water flea): DAPPUDRAFT_321368
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Entry
DAPPUDRAFT_321368 CDS
T04347
Name
(GenBank) hypothetical protein
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
dpx
Daphnia pulex (common water flea)
Brite
KEGG Orthology (KO) [BR:
dpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpx03009
]
DAPPUDRAFT_321368
Enzymes [BR:
dpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DAPPUDRAFT_321368
Ribosome biogenesis [BR:
dpx03009
]
Eukaryotic type
90S particles
Helicases
DAPPUDRAFT_321368
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
EFX77543
JGI:
Dappu1_321368
UniProt:
E9GSQ0
LinkDB
All DBs
Position
Unknown
AA seq
581 aa
AA seq
DB search
MDARDLFRRLSAGAKFDKNRFKNDAIKFQLAQKQPSSTSLSNSTLAIDTTQDQHNHQPEN
DIDNNSCEENEEYETVEDIVDPRAEIKALRRERKKKIKTPKELATLKKEEISRKRKAHKI
HVQGSDIPTPVETFEELAQQFSIKEELIKNIQTRGYEVPTPIQMQAIPLMLKKREILACA
PTGSGKTAAFLVPIIHCLGAPQKKGFRAVIVSPTRELANQTHRECVKLTEGIGLRCHVID
NVGKATQKFGPKSSQRFDILITTPNRLVFLLSQEPPAISLKNVEWLIVDESDKLFEEGRQ
GFRDQLGAIYRACDSNQIRRAFFSATFAFDVQEWCKLNLDNVVMLTIGQKNSASEKVEQQ
LIFAGSEGGKLMAFRNLIVEGLNPPVLVFVQTKERAKELYTELVYDGINVDVIHAERSQL
QRDNVVKSFRSGQIWVLICTELMGRGIDFKGVNLVVNYDFPPSAISYIHRIGRTGRAGRP
GKAITFFTESDAVYLRKIATVMRNSGCEVPEYMLQMKKTSRSDAKKMARKVPTRKSISTE
PLPDKIKRKKRERIIANVRKNKQNGQQGPSSKKQKILANNV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatgctcgtgacttgttcaggcgactgtcagctggcgcaaaatttgacaaaaacaga
ttcaagaatgatgctattaagtttcagctagctcaaaaacaaccttcctctacttcattg
agcaattctactctagcaattgacactacacaagaccagcataatcatcaaccagaaaat
gatatcgacaacaattcatgtgaagaaaatgaagagtatgaaactgtggaagacattgtt
gatcctagagcagaaattaaagcattgcggcgtgaaaggaaaaagaaaataaaaacacct
aaagagttagccacactgaagaaagaggaaatcagcagaaagagaaaagcccacaaaata
catgtccagggtagtgatattccaactccagttgaaacgtttgaagagcttgcacagcag
ttcagtatcaaagaagagctgattaaaaacattcaaacacgaggctatgaagtccctact
ccaattcagatgcaagctattcctttgatgctgaagaaaagagagattttggcttgtgcc
cctacaggatcaggaaaaactgctgcatttttggtcccgatcatacattgtcttggagcc
ccacagaaaaaaggtttcagagcggtcatcgtatctcctactcgcgagttagccaatcag
actcacagggaatgcgttaaactaacggaaggaattggtttacgttgtcacgtaatagac
aatgtaggcaaagctacgcagaaatttgggccaaagtcatctcaaagattcgatatcctt
atcactacaccaaatcgattggtctttttgctctcgcaagaaccacctgcgatttcgtta
aaaaatgtggagtggcttattgttgacgaatcagacaagttgtttgaagaaggacgccaa
gggtttcgtgatcaattgggggcaatttaccgggcatgcgattctaatcagatcagacga
gctttcttcagtgcaacttttgcattcgacgtccaagagtggtgcaaattaaatcttgac
aacgtagttatgctcactatcggacaaaagaattctgcttccgaaaaggtggaacaacaa
cttatcttcgctgggagcgaaggtggaaaactaatggcattccgcaaccttattgttgag
ggtcttaatccaccagttttagtatttgttcagacaaaagaacgagcaaaagaattatac
actgaacttgtgtatgacggtataaatgttgacgtcattcacgcagagcgttctcaactt
caacgtgacaatgtggtgaaaagctttcgctccggtcaaatttgggtacttatatgtacg
gagcttatgggtcgtggtattgatttcaaaggtgttaaccttgtggtcaattacgacttt
ccgccatctgccatcagttacatccaccgaattggtcgaacggggcgcgccggtcgtcca
ggcaaagcaattacttttttcacagagagtgatgcagtttacctccgcaagattgccact
gtaatgcggaattccggatgcgaggtaccagagtacatgttgcaaatgaagaaaacctca
aggagcgatgccaagaagatggcccggaaggtccctactcgaaaatctatttccacggaa
ccgctccccgacaagattaagcggaaaaaacgtgaaaggatcatcgccaacgttcgaaaa
aacaaacaaaatggacagcaagggccgtcatctaagaagcagaaaattttggccaataat
gtgtaa
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