Deinococcus radiodurans: DR_0911
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Entry
DR_0911 CDS
T00025
Name
(RefSeq) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
dra
Deinococcus radiodurans
Pathway
dra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DR_0911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dra03021
]
DR_0911
03400 DNA repair and recombination proteins [BR:
dra03400
]
DR_0911
Enzymes [BR:
dra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DR_0911
Transcription machinery [BR:
dra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DR_0911
DNA repair and recombination proteins [BR:
dra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DR_0911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RPOC_hybrid
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Apocytochr_F_C
DUF244
Motif
Other DBs
NCBI-GeneID:
1798646
NCBI-ProteinID:
NP_294635
UniProt:
Q9RVW0
LinkDB
All DBs
Position
1:complement(918781..923421)
Genome browser
AA seq
1546 aa
AA seq
DB search
MKDFNKVRIAIASPEKIREWSFGEVEKPETINYRTLKPEREGLFDERIFGPIKDYECACG
KYKRQRYEGKVCERCGVEVTSSKVRRYRMGHIDLATPAAHIWYVKDSPSKIGTLLDLSAG
QLEKVLYFSSFIVTKPFNAQKDGRPLKRGELLSDDEYRELRFGRQETYTIPNSVEDVEIR
DGEYVTRGQILGGNVVSKMDGLAQYRFPRRAVIAYSEGVEASLPLPADTLVEQETFRAGE
ILAELEQDVQITAPVAGTVFMHDLGEDSVMIELREGVEANDSDEEEAADPIRGEVLARVY
VPHGMNVQVAEGEVIEAGALLADASEGARLRVSRDSNLSGVTFPKKKGDVTVTAHWTRRV
EYPIDPTMHVLVGDGSEVTKGQRVIGAIDKEEEVIAEADGVITLHQPASILVSKAKVYAY
DDEPLVVNGDRVEPGDELADDGNLRSEISGRIELDLVRKQVRVIESYDFEAKMGAEAVKE
LLDELNLDELETELNEQMKDNSRHKRAKARKRLEVTRSFKASGNNPSWMILGTVPVMPPD
LRPMVQVDGGRFATSDLNDLYRRLINRNNRLKKLMSQGAPDMIIRNEKRMLQEAVDALID
NGRRGSPVTNPGSDRSLRSLTDLLGGKQGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCG
VPKRMALELFKPFLFKVLEEKGEVTNIKQARKMLERYRDTRDSVWDALEEVIEDKVVLLN
RAPTLHRLGIQAFEPVLVEGQSIQLHPLVCEAFNADFDGDQMAIHVPLSAQAQAEARIQM
LASHNLLSPANGEPNVKPSRDIILGIFTLTQLRRDNLGAGTEYASEADALAAFDEGKLSL
NSPVMVNGVETSPGRLRYTFSNPDEALHAVEQGEIDHQDHVRIRLNGQVYETSAGRVQFR
RMVQEALGAQGGLIDTLVDLETTYEKDALKDMVMACFKHLGIEATAGLLDGLKEGGFKLS
TTSGITIGIDDIVLPPNKGELLAEADQMLAEIEQNFEFGFMTEEERYKQVVQLWNNTTDA
VKDAVFENFSKNYPFNPLWIMSQSGARGNPQQIRQLAGMRGLMARPDGSTIEVPIRASFR
EGLTVLEYFISTHGARKGGADTALRTADSGYLTRKLVDVAHEVVVRDVDCGSTDSTVMPL
GATDERTGEWRSRKGSEIETSIYGRTLTADVEFSDGRVIPEGEMLSMEDVKAIAKDAKHI
GEVFVRTPLNCRVKAGVCQKCYGYDLSQAKPVSMGEAVGVVAAESIGEPGTQLTMRTFHT
GGIAGGGDITMGLPRVIELFEARKPKTQAVVADRDGVIRIEEEEERYLVRIEADDEQYSS
KTATKVPRVLRMTVKDGERVEAGQPITRGAVNPHDLLMYKDTDAAQRYLVEEVQRVYRSQ
GVKVHDKHIEVIVRQMLRWVEVTDGGDTTLLEGQTVEHWEVDQANEALAEGQTPASWKPV
LLGITKSSLTTKSWLSAASFQHTTHVLTEASMRGQVDDLIGLKENVILGKLIPAGTGLLT
VREMQVADDRTLEKYGEGSTSSDAVTGGQRYDDTRPGSSINPGYGD
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacttcaacaaagtccgcatcgccatcgccagcccggagaagatccgcgaatgg
tcgttcggcgaggtcgaaaagcctgaaaccatcaactaccgcaccctgaagcccgagcgc
gaaggtctgttcgacgagcgcatctttgggccgatcaaggactacgagtgcgcctgcggc
aagtacaagcgccagcgatacgagggtaaggtctgcgagcgctgcggcgtcgaagtgacc
tccagcaaggtgcgccgctaccgcatgggtcacatcgacctcgcgacccctgccgcgcac
atctggtacgtcaaggacagccccagcaagatcggcaccctgctcgacctgagcgccggg
caactcgaaaaggtgctgtacttcagctcctttatcgtgaccaagcctttcaacgcgcag
aaagacgggcggcccctcaagcgcggcgaactgctgagcgacgacgagtaccgcgaactg
cgctttgggcggcaggaaacctacaccatccccaacagcgtcgaagacgtggaaatccgc
gacggcgagtacgtcacccgtggacagattctgggcggcaacgtggtgtccaagatggac
ggcctcgcgcagtaccgtttcccccgccgcgccgtgattgcttacagcgaaggcgtggaa
gccagcctgccgctgcccgccgatacgttggtcgagcaggaaaccttccgcgccggtgaa
atcctggccgaactcgaacaggacgtgcagatcaccgcgccggtggccggcaccgtgttc
atgcacgacctcggcgaagactcggtgatgatcgaactgcgcgaaggcgtggaagcgaac
gacagcgacgaggaagaagccgccgaccccattcgcggtgaagtgctggcccgcgtgtac
gtgccccacggcatgaacgtgcaggtggccgaaggcgaagtcatcgaagccggcgcgctt
ctggccgacgccagcgaaggcgcccgcctgcgcgtgagccgtgacagcaacctcagcggc
gtgaccttccccaagaagaagggcgacgtgaccgtgaccgcgcactggacccgccgggtg
gagtaccccatcgaccccaccatgcacgtgctcgtcggtgacggcagcgaagtaacgaag
ggccagcgcgtgatcggcgcgattgacaaggaagaagaagtcatcgcggaagccgacggc
gtcatcaccctgcaccagcccgccagcattctggtgagcaaggccaaggtctacgcctac
gacgacgagccgctggtggtcaacggtgaccgtgtggaacccggcgacgaactcgccgac
gacggcaacctgcgcagcgaaatctcgggccgcatcgaactcgacctcgtgcgtaagcag
gtgcgcgtcatcgagtcctacgacttcgaagccaagatgggcgccgaagccgtcaaggaa
ctgctcgacgaactcaacctcgacgaactcgaaaccgagctcaacgagcagatgaaggac
aacagccgccacaagcgcgccaaggcccgcaagcggctggaagtcacccgctccttcaag
gcgagcggcaacaacccctcgtggatgattctcggcaccgtgccggtgatgccaccagac
ctgcgcccgatggtgcaggtggacggcgggcgctttgcgacttccgacctcaacgacctg
taccgccgcctgatcaaccgcaacaaccgcctcaagaagctgatgagccagggtgcgccc
gacatgatcatccgcaacgaaaagcgcatgttgcaagaagcggtggacgccctgatcgac
aacggtcgccgcggcagccccgtgaccaaccccggcagtgaccgcagcctgcgctcgctg
accgacctgctcggcggcaagcagggccgcttccgccagaacctgctcggcaagcgtgtg
gactactcgggccgctcggtcatcgtggtcggcccgcagctcaagctgcaccagtgtggg
gtgcccaagcgcatggcgctcgaactcttcaagcccttcttgttcaaggtgctcgaagag
aagggcgaagtcaccaacatcaagcaggcccgcaagatgctcgaacgctaccgcgacacc
cgcgacagcgtgtgggacgccctcgaagaagtgatcgaggacaaggtcgtgctgctcaac
cgcgcgccgacgctgcaccgtctgggcattcaggcgttcgagccggtgctggtcgaaggc
cagagcatccagctgcacccgctcgtctgtgaagcctttaacgccgacttcgacggcgac
cagatggcgattcacgtcccgctctcggcgcaggcgcaggccgaagcccgcattcagatg
ctggcctcgcacaacctgctctcccccgccaacggcgagccgaacgtcaagcccagccgc
gacatcatcctcggcatcttcaccctgacccagctgcggcgcgacaaccttggcgcgggc
accgagtacgccagcgaagccgacgcgctcgcggccttcgacgaaggcaagctcagcctc
aacagcccggtcatggtcaacggcgttgagaccagccccggtcgcctgcgctacaccttc
tccaaccccgacgaagcgctccacgccgtcgaacagggcgagatcgaccaccaggaccac
gtgcggattcgtctgaacggtcaggtgtacgaaaccagcgccgggcgcgtgcagttccgc
cgcatggtgcaagaagcgctgggcgctcagggcggcctgatcgacaccctggtcgacctc
gaaaccacctacgagaaggacgccctcaaggacatggtcatggcgtgcttcaagcacctc
ggcattgaagcgaccgccgggctgctcgacggcctcaaggaaggcggcttcaagctgtcg
accacctcgggcatcaccatcggcatcgacgacatcgtgctgccgcccaacaagggtgaa
ctgctggccgaagccgaccagatgctcgccgagatcgagcagaacttcgagttcggcttc
atgaccgaggaagagcgctacaagcaggtcgtgcagctgtggaacaacaccaccgacgcc
gtgaaggacgccgtgttcgagaacttctcgaagaactaccccttcaacccgctgtggatc
atgagccagtcgggggcgcgcgggaacccgcagcagattcgtcagcttgctgggatgcgc
ggcctgatggcccgcccggacggctcgaccatcgaagtgccgattcgcgccagcttccgc
gaaggcctgaccgtgctggagtacttcatctccacccacggcgcccgtaagggtggggcc
gacaccgcgctgcgtaccgccgactcgggctacctgacccgcaagctggtggacgtggcc
cacgaagtcgtcgtgcgtgacgtggactgcggcagcaccgactccaccgtgatgccgctg
ggtgcgaccgacgagcgcaccggcgaatggcgcagccgcaagggcagcgaaatcgaaacc
agcatctatggccgcaccctgaccgccgacgttgagttcagcgacgggcgcgtgattccc
gaaggcgaaatgctctcgatggaagatgtgaaggcgattgccaaggacgccaagcacatc
ggcgaagtgtttgtccgcacgccactcaactgccgcgtcaaggcgggcgtgtgccagaag
tgctacggctacgacctctcgcaagccaagcccgtgagcatgggcgaagcggtgggcgtg
gtggccgccgaatccatcggcgaacccggcacgcagctcaccatgcgcaccttccacacc
ggcgggatcgcgggcggcggcgacatcacgatgggtctgccccgcgtgatcgagctgttc
gaagcgcgcaagcccaagacccaggccgtggtcgccgaccgcgatggcgtgatccgcatt
gaagaggaagaagagcgttacctcgtgcgtatcgaagccgacgacgagcagtactcctcc
aagaccgccaccaaggtgccccgcgtgctgcgcatgacggtcaaggacggcgagcgcgta
gaagccgggcagccgatcacccgcggcgcggtcaacccgcacgacctgctgatgtacaag
gacaccgacgccgcccagcgctacctggtggaagaagtgcagcgcgtgtaccgctcgcag
ggcgtgaaggtccacgacaagcacatcgaagtgatcgtgcgccagatgctgcgctgggtc
gaagtgactgacggcggcgacaccacgctgctcgaagggcagaccgtggagcactgggaa
gtcgatcaggccaacgaggcgctggcagaaggccagacccccgcgagctggaagccggtg
ctgctcggcatcaccaagagcagcctgaccaccaagtcgtggctctccgccgcctccttc
cagcacaccacccacgtgctgaccgaagcctccatgcgcggccaggtcgacgacctgatc
ggcctgaaggaaaacgtcatcctcggcaagctgattccggcgggcaccggcctgctgacg
gtccgcgaaatgcaggtggccgacgaccgcaccctcgagaagtacggcgaaggcagcacc
tcctccgacgccgtgaccggcgggcagcggtacgacgacacccgccccggcagcagcatc
aaccccggctacggcgactga
DBGET
integrated database retrieval system
