Desmodus rotundus (common vampire bat): 112308505
Help
Entry
112308505 CDS
T05907
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1 isoform X1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
dro
Desmodus rotundus (common vampire bat)
Pathway
dro03020
RNA polymerase
dro03420
Nucleotide excision repair
dro05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
dro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112308505 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
112308505 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
112308505 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dro03021
]
112308505 (POLR2A)
03400 DNA repair and recombination proteins [BR:
dro03400
]
112308505 (POLR2A)
Enzymes [BR:
dro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112308505 (POLR2A)
Transcription machinery [BR:
dro03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
112308505 (POLR2A)
DNA repair and recombination proteins [BR:
dro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
112308505 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
112308505
NCBI-ProteinID:
XP_024420548
LinkDB
All DBs
Position
Unknown
AA seq
1956 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGILSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPN
YTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQ
SPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKY
SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTS
PKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggaattctgagtccggatgaactgaagcgaatgtctgtaacagagggtggt
atcaaataccctgagacaactgagggaggtcgccccaagcttgggggccttatggatccg
aggcagggggtgattgagcggactggccgctgccaaacatgtgcaggaaacatgacagag
tgtcctggccacttcggccacattgagctggccaaacctgtgtttcacgtgggcttcctg
gtgaagacgatgaaagttttgcgctgtgtctgcttcttctgctccaaattgcttgtggac
tctaacaacccaaagatcaaggacattttggcgaagtccaaggggcagcccaagaagcgg
ctcacacatgtctatgacctctgcaagggcaaaaacatctgcgaggggggggaggagatg
gacaacaagtttggtgtggagcagcctgaaggcgatgaggatttgaccaaagaaaagggc
catggtggctgtgggcggtaccagcccaggatccggcgctcaggcctggagctgtatgca
gagtggaagcatgtcaacgaggactctcaggagaagaagatcctgctgagtcctgagcga
gtgcatgagatcttcaaacgcatctcagatgaggagtgttttgtgctgggcatggagcca
cgctatgcccgacctgagtggatgattgtcacagtgctgcctgttcctcccctctccgtg
cgacctgctgttgtgatgcagggttctgcccgcaaccaggatgacctgactcacaaactg
gccgacatcgtgaagatcaacaatcagcttcggcgcaatgagcagaacggtgcggcagcc
catgtcattgcagaggacgtgaagctcctccagttccatgtggccaccatggtggacaat
gagctgcctggcttgcctcgcgccatgcagaagtctgggcgtcccctcaagtccctgaag
cagcggttaaagggcaaggaaggcagggtgcgagggaatctgatgggcaagcgagtggac
ttctcggcccgcactgtcatcactcccgaccccaacctctccattgaccaggttggcgtg
cctcgctccattgccgccaacatgacctttgcagagattgtcacccccttcaacattgac
agacttcaggaactagtgcgcaggggtaacagccagtacccaggggccaagtacatcatc
cgagacaacggagatcgcattgacctacgttttcaccccaagcccagtgaccttcaccta
cagactggttataaggtggaacggcacatgtgcgatggcgacattgttatcttcaaccgg
cagccaactttgcataaaatgtccatgatgggacatcgggtccgcatcctcccctggtct
acttttcgcttgaacctcagtgtgacgaccccgtacaatgctgactttgatggcgatgag
atgaacttgcacctgccacagtctcttgagacacgggcggagatccaggagcttgccatg
gtgccacgcatgattgtcactccccagagcaatcgccctgtcatgggcattgtgcaggac
acgctcactgcagtgcgcaaattcactaagagagatgtcttcctggagcggggtgaagtg
atgaacctcctaatgttcctgtccacgtgggacgggaaggtcccgcagccagccatcctg
aagccccggcccctgtggacaggcaaacagatcttctccctcatcataccaggtcacatc
aactgtatccgcacccacagcacccaccctgacgatgaggacagtggcccttataagcac
atctctcctggggacactaaagtggtggtggagaacggggagctgatcatgggcattctg
tgtaagaagtctttgggcacatcagccggctccctggtccacatctcttacctagagatg
ggtcatgacatcactcgcctcttctactccaatattcagactgtcattaacaattggctc
ctcatcgagggtcataccattggcattggggactccattgctgattctaagacttaccag
gacattcagaacactattaagaaggccaagcaggatgtaatagaggtcatcgagaaggcc
cataacaatgagctggagcccacccccgggaacactctgcggcagacgtttgagaaccag
gtgaaccgtattctcaacgacgcccgagacaagactggctcctctgcccagaaatctctg
tctgagtacaacaactttaagtctatggttgtgtctggagctaaaggttccaagatcaac
atctcccaggtcattgctgtcgttgggcagcagaacgtggagggaaagcggatcccattt
gggttcaagcaccggactctgccgcacttcatcaaggatgactatgggcctgagagccgt
ggctttgtggagaactcctacctggctggcctcacacccaccgagttctttttccatgcc
atggggggccgtgaagggctcattgacactgctgtcaagactgctgagacaggatatatc
cagcggcggctgatcaagtccatggagtcagtgatggtgaagtatgacgccaccgtgcgg
aactccatcaaccaagtggtgcagctgcgctatggcgaggatggcctggcaggcgagagc
gtggagttccagaacctggctacccttaagccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctgaggcgcactctgcaggaggatctggtgaag
gatgtgctgagcaacgcacacattcagaatgagctggagcgagaatttgaaaggatgcgt
gaggatcgggaggtgctcagggtcatcttcccaactggggacagcaaggttgtcctcccc
tgtaacctgcttcgcatgatctggaatgctcagaaaatcttccatatcaaccctcgcctt
ccctccgacctgcaccccatcaaggtggtagagggagtcaaggaattgagcaagaagctg
gtgattgtgaatggggatgacccactgagccggcaggctcaggagaacgccacactgctc
ttcaacattcacctccgatccacgctgtgttcccgccgaatggcagaggaatttcggctc
agtggagaggccttcgactggctgctgggagagattgagtccaagttcaaccaagccatt
gcccatcctggggaaatggtgggcgctttggctgcacagtccctcggagaacccgcaacc
cagatgaccttgaacaccttccactatgctggggtgtctgccaagaatgtgacgctgggt
gtgccccgacttaaggagctcatcaacatttcaaagaagccaaagactccctcacttact
gtctttctgctgggccagtctgctcgagatgctgagagagccaaggacattctgtgccgt
ctggaacatacaacgttgaggaaggtgactgccaacacagccatctactatgaccccaac
ccccagagcacggtggtagcagaggatcaggaatgggtgaatgtctactatgagatgcct
gactttgacgtggcccgaatctctccctggcttttgcgagtggagctggaccggaaacac
atgactgaccggaagctgaccatggagcagattgctgaaaaaatcaatgccggttttggc
gatgatttgaattgcatctttaatgatgataatgcagaaaagctggtgctccgcatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaagaagaggtggtggacaagatggat
gatgatgttttcctgcgctgcatcgagtccaacatgctgacagatatgaccctgcagggt
attgagcagatcagcaaggtgtacatgcacttgccacagacagacaataagaagaagatc
attatcacagaggacggggaattcaaggccctgcaagagtggattctggagaccgacggt
gtgagcttaatgcgggtgctgagtgagaaggacgtggaccctgtgcgcaccacgtccaat
gatatcgtggagatctttacggtattgggtattgaagccgtacggaaggccttggagcgg
gagctgtaccacgtcatctcctttgatggttcctacgttaattaccggcatttggccctc
ttgtgtgataccatgacctgtcgtggccacttgatggccatcacgcgacatggagtcaac
cgccaggatactggacctctcatgaaatgctcctttgaggaaacggtggatgtgctcatg
gaagcagctgcccatggagagagcgaccccatgaagggggtatctgagaacatcatgctg
ggccagctcgctccagctggcactggctgctttgacctcctactcgatgcggagaagtgc
aagtatggaatggagatccccaccaatatccccggcttgggtgctgctggacccactggc
atgttcttcggctcagcacccagtcccatgggaggaatttctccggccatgacaccctgg
aatcagggtgcaaccccagcctacggcgcctggtcccccagtgttggaagtggaatgact
ccaggggcagctggcttttctcccagcgctgcttcggatgccagtggcttcagcccgggt
tattcccctgcctggtctcccacacctggctccccaggctcaccgggcccctcaagccca
tacatcccctcgccaggtggtgccatgtctcccagctactcaccaacatcacctgcttac
gagccccgctcccctgggggctacacgccccagagtccctcttactcccccacttcaccc
tcctactcccctacctctccatcctattctccaaccagtcccaattatagtcccacgtct
cccagctactccccaacctctcccagttattctcccacctctcccagctactctccaact
tccccaagctactcgcccacatcacctagctactcgccaacctctcccagttactcaccc
acatctcccagttactcaccaacctctcccagttactcaccaacgtcacccagctattcg
cccacctctcccagctactcgccaacgtcacccagctattctcccacctctcccagctac
tcaccaacttccccaagttattctcccaccagccctaactattctccaactagtcccaat
tataccccgacatcacccagctatagcccaacctcgcccagctactcacctactagtccc
aactacacaccaacaagccctaactacagcccaacctctccaagctactctccaacttca
cccagctactccccgacctcaccaagctactccccttcaagtccacggtatacaccacag
tcaccaacctataccccgagttctcccagctacagtcccagctcgcccagctacagccct
acctcaccaaagtataccccaaccagcccttcctacagtcccagctcaccagagtatacc
ccaacctctcccaagtactcacctaccagcccaaaatactcacccacctcccccaagtac
tcgcccaccagccctacctattcacccaccaccccgaaatactcaccaacgtctcctact
tactcaccaacctctccagtctatactccaacctcccccaagtactcacctactagcccc
acttactcacccacctcccccaagtactcgcccaccagccccacctattcacccacctcc
cccaaaggctctacctactctcccacttcccctggctactcgcccaccagccccacttac
agtctcaccagcccagccatcagcccagatgacagtgatgaggagaactga
DBGET
integrated database retrieval system
